RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	OVOL3	O00110	214 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	LGALS8	O00214	317 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	HSPB6	O14558	160 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	PSPN	O60542	156 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	RP2	O75695	350 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	RBBP9	O75884	186 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	ZNF205	O95201	554 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	GLA	P06280	429 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	FCER2	P06734	321 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	LYNX1	P0DP58	116 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	NAT1	P18440	290 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	COL8A2	P25067	703 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	RCVRN	P35243	200 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	PRR20E	P86478	221 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	PRR20C	P86479	221 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	PRR20D	P86480	221 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	PRR20B	P86481	221 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	PRR20A	P86496	221 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	ASAH1	Q13510	395 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	PAN3	Q58A45	887 aa	Known RBP	12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	SHE	Q5VZ18	495 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	ZNF57	Q68EA5	555 aa	Predicted RBP	12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	STUM	Q69YW2	141 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	C1orf87	Q8N0U7	546 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	GVQW1	Q8N7I0	195 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	ANGPTL6	Q8NI99	470 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	PLPPR1	Q8TBJ4	325 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	SETD6	Q8TBK2	473 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	NEU4	Q8WWR8	484 aa	Predicted RBP	12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	CMSS1	Q9BQ75	279 aa	Known RBP	12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	GLS2	Q9UI32	602 aa		12.46	□□□□□ -0.41
COPS7B-222	ENST00000492423	LRRC30	A6NM36	301 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	MCRIP1	C9JLW8	97 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	SSX4	O60224	188 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	ZNF737	O75373	536 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	LY6H	O94772	140 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	PRDX2	P32119	198 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	INPP1	P49441	399 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	ACTB	P60709	375 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	ACTG1	P63261	375 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	COL10A1	Q03692	680 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	BPIFB2	Q8N4F0	458 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	TOMM5	Q8N4H5	51 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	POC5	Q8NA72	575 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	CCL17	Q92583	94 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	SNAPC3	Q92966	411 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	OCSTAMP	Q9BR26	566 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	C11orf54	Q9H0W9	315 aa	Predicted RBP	12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	PPA2	Q9H2U2	334 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	COL12A1	Q99715	3063 aa		12.45	□□□□□ -0.42
COPS7B-222	ENST00000492423	PPIAL4E	A0A075B759	164 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	IGKV1D-8	A0A087WSZ0	117 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	PPIAL4D	F5H284	164 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	NDUFS7	O75251	213 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	NAPSA	O96009	420 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	FCGR3A	P08637	254 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	PPIAL4F	P0DN26	164 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	MUC1	P15941	1255 aa	Predicted RBP	12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	DTYMK	P23919	212 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	CBX5	P45973	191 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	OR3A1	P47881	315 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	DYRK1A	Q13627	763 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	C17orf107	Q6ZR85	190 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	GAPT	Q8N292	157 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	TMEM229B	Q8NBD8	167 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	DEFB108B	Q8NET1	73 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	OR4S1	Q8NGB4	309 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	MRPL30	Q8TCC3	161 aa	Known RBP	12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	NEK7	Q8TDX7	302 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	MAFIP	Q8WZ33	124 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	C14orf79	Q96F83	325 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	GAFA1	Q96PS6	74 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	PSMG3-AS1	Q96PY0	264 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	IFT46	Q9NQC8	304 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	ETAA1	Q9NY74	926 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	ZNF107	Q9UII5	783 aa	Predicted RBP	12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	PPIAL4A	Q9Y536	164 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423	ADGRG4	Q8IZF6	3080 aa		12.44	□□□□□ -0.42
COPS7B-222	ENST00000492423		A0A1B0GW55	424 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	TNFRSF13B	O14836	293 aa	Predicted RBP	12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	LYRM1	O43325	122 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	ECD	O95905	644 aa	Predicted RBP	12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	GYPA	P02724	150 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	CD74	P04233	296 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	CSF1	P09603	554 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	GSTT2B	P0CG30	244 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	DUX4L2	P0CJ85	424 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	DUX4L3	P0CJ86	424 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	DUX4L4	P0CJ87	422 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	DUX4L5	P0CJ88	424 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	DUX4L6	P0CJ89	424 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	DUX4L7	P0CJ90	424 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	SELL	P14151	372 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	BTC	P35070	178 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	MDH2	P40926	338 aa	Known RBP	12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	GABRA2	P47869	451 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	RFX2	P48378	723 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	DEFA1	P59665	94 aa		12.43	□□□□□ -0.42
COPS7B-222	ENST00000492423	DEFA3	P59666	94 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms