RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PHYHIPLQ96FC7 376 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 PRDM14Q9GZV8 571 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 ESRP2Q9H6T0 727 aaKnown RBP10.68□□□□□ -0.7
HMGN1-220ENST00000492280 TAF9BQ9HBM6 251 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 TREM1Q9NP99 234 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 ZDHHC8Q9ULC8 765 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 ACACAQ13085 2346 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 IL18BPO95998 194 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 CA6P23280 308 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 HERV-K104P61576 105 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 HERPUD1Q15011 391 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 SURF2Q15527 256 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-220ENST00000492280 PLA2G2CQ5R387 149 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 ASCL4Q6XD76 172 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 CBLN2Q8IUK8 224 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 ZDHHC23Q8IYP9 409 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 PUSL1Q8N0Z8 303 aaKnown RBP10.67□□□□□ -0.7
HMGN1-220ENST00000492280 EIF4E3Q8N5X7 224 aaKnown RBP10.67□□□□□ -0.7
HMGN1-220ENST00000492280 SLC35G3Q8N808 338 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 TSNAXQ99598 290 aaKnown RBP10.67□□□□□ -0.7
HMGN1-220ENST00000492280 MAGT1Q9H0U3 335 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 PQLC2LA1A4F0 135 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 DNASE2O00115 360 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-220ENST00000492280 HSD17B6O14756 317 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 FGF16O43320 207 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 DEDDO75618 318 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 PPYP01298 95 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 DTYMKP23919 212 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 EIF3IQ13347 325 aaKnown RBP10.67□□□□□ -0.7
HMGN1-220ENST00000492280 ARL6IP1Q15041 203 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 TMEM268Q5VZI3 342 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 COLCA1Q6ZS62 124 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 SPSB4Q96A44 273 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 PRRX2Q99811 253 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 RGCCQ9H4X1 137 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 ABI3Q9P2A4 366 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 AMDHD2Q9Y303 409 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 RELNP78509 3460 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 PLCE1Q9P212 2302 aa10.67□□□□□ -0.7
HMGN1-220ENST00000492280 IFNA21P01568 189 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 ARG2P78540 354 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 NHLH2Q02577 135 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 CLN3Q13286 438 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 ALKBH6Q3KRA9 238 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 DHRS11Q6UWP2 260 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 MDP1Q86V88 176 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 RNF141Q8WVD5 230 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 POM121L2Q96KW2 1035 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 TLNRD1Q9H1K6 362 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 SH3BGRL3Q9H299 93 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 EDARQ9UNE0 448 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 F8W036 122 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 TRIM77I1YAP6 450 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 OMGP23515 440 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 GLP1RP43220 463 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 BLOC1S1P78537 153 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 IZUMO4Q1ZYL8 232 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 ZNF818PQ6ZRF7 136 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 NKX6-2Q9C056 277 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-220ENST00000492280 WFDC1Q9HC57 220 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 RCL1Q9Y2P8 373 aaKnown RBP10.66□□□□□ -0.7
HMGN1-220ENST00000492280 MEMO1Q9Y316 297 aa10.66□□□□□ -0.7
HMGN1-220ENST00000492280 IGKV1-6A0A0C4DH72 117 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 A0A1B0GW55 424 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 TMEM218A2RU14 115 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 NKX2-8O15522 239 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 CA11O75493 328 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 LYZL6O75951 148 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 TFF1P04155 84 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 DUX4L2P0CJ85 424 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 DUX4L3P0CJ86 424 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 DUX4L4P0CJ87 422 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 DUX4L5P0CJ88 424 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 DUX4L6P0CJ89 424 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 DUX4L7P0CJ90 424 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 PET100P0DJ07 73 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 LYL1P12980 280 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 MUC1P15941 1255 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-220ENST00000492280 TAGLNQ01995 201 aaKnown RBP10.65□□□□□ -0.7
HMGN1-220ENST00000492280 ZNF528Q3MIS6 628 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 LDLRAD3Q86YD5 345 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 GAPTQ8N292 157 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 HSD17B11Q8NBQ5 300 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 IL1F10Q8WWZ1 152 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 MOB3AQ96BX8 217 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 MSI2Q96DH6 328 aaKnown RBP10.65□□□□□ -0.7
HMGN1-220ENST00000492280 GPR87Q9BY21 358 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 PIGMQ9H3S5 423 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 DUX4Q9UBX2 424 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 LPAR3Q9UBY5 353 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 MRPS18CQ9Y3D5 142 aaKnown RBP10.65□□□□□ -0.7
HMGN1-220ENST00000492280 NKX2-6A6NCS4 301 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 C21orf140B9A014 251 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 CDK2AP1O14519 115 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 NME2P1O60361 137 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 GNRHRP30968 328 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 IDH3GP51553 393 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-220ENST00000492280 SMCO1Q147U7 214 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 PPA1Q15181 289 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms