RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 GTF3AQ92664 365 aaKnown RBP6.35□□□□□ -1.39
CLDN1-202ENST00000490800 S100A13Q99584 98 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 NICN1Q9BSH3 213 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 ADAT1Q9BUB4 502 aaKnown RBP6.35□□□□□ -1.39
CLDN1-202ENST00000490800 RTL8AQ9BWD3 113 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 TM2D1Q9BX74 207 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 TMEM59Q9BXS4 323 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 SLC22A4Q9H015 551 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 CST11Q9H112 138 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 ELL3Q9HB65 397 aaPredicted RBP6.35□□□□□ -1.39
CLDN1-202ENST00000490800 MSL2Q9HCI7 577 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 DIABLOQ9NR28 239 aa6.35□□□□□ -1.39
CLDN1-202ENST00000490800 ISPDA4D126 451 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 TMEM210A6NLX4 147 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 FOXI3A8MTJ6 420 aaPredicted RBP6.34□□□□□ -1.39
CLDN1-202ENST00000490800 J3QT63 122 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 M0R233 179 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 SOCS1O15524 211 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 SYNGR1O43759 233 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 SFTPBP07988 381 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 CHRM2P08172 466 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 PTHLHP12272 177 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 MGMTP16455 207 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 BCL3P20749 454 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 MPZP25189 248 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 VEGFCP49767 419 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 GPR176Q14439 515 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 CR1LQ2VPA4 569 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 RNASE12Q5GAN4 147 aaKnown RBP6.34□□□□□ -1.39
CLDN1-202ENST00000490800 TRIQKQ629K1 86 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 RAB12Q6IQ22 244 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 HAGHLQ6PII5 290 aaPredicted RBP6.34□□□□□ -1.39
CLDN1-202ENST00000490800 RTN4RL2Q86UN3 420 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 FAM89BQ8N5H3 189 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 LINC01356Q8N9X3 169 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 Q8NFD4 153 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 OR10AD1Q8NGE0 317 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 OR51T1Q8NGJ9 327 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 OR10R2Q8NGX6 335 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 OR13G1Q8NGZ3 307 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 OR51F2Q8NH61 342 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 OR52I2Q8NH67 350 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 C15orf40Q8WUR7 153 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 SMIM4Q8WVI0 70 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 GCDHQ92947 438 aaPredicted RBP6.34□□□□□ -1.39
CLDN1-202ENST00000490800 YIPF5Q969M3 257 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 TRIM63Q969Q1 353 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 SLAMF9Q96A28 289 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 PHF21AQ96BD5 680 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 NUDT16L1Q9BRJ7 211 aaKnown RBP6.34□□□□□ -1.39
CLDN1-202ENST00000490800 THAP7Q9BT49 309 aaPredicted RBP6.34□□□□□ -1.39
CLDN1-202ENST00000490800 PKIBQ9C010 78 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 SELENOIQ9C0D9 397 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 AUNIPQ9H7T9 357 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 MTCH1Q9NZJ7 389 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 TAAR3PQ9P1P4 343 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 TBC1D24Q9ULP9 559 aa6.34□□□□□ -1.39
CLDN1-202ENST00000490800 STAB1Q9NY15 2570 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 MALRD1Q5VYJ5 2156 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 MEIOCA2RUB1 952 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 ZSCAN5BA6NJL1 495 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 F5H5P2 479 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 F8VVB4 439 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 F8VWA3 439 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 GABARAPH6UMI1 98 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 WNT9BO14905 357 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF780AO75290 641 aaPredicted RBP6.33□□□□□ -1.4
CLDN1-202ENST00000490800 RHBDL1O75783 438 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 SCGNO76038 276 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 CSTBP04080 98 aaKnown RBP6.33□□□□□ -1.4
CLDN1-202ENST00000490800 CD3GP09693 182 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 GTF2F2P13984 249 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 HNF1AP20823 631 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 CD200P41217 278 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 GPR6P46095 362 aaPredicted RBP6.33□□□□□ -1.4
CLDN1-202ENST00000490800 NPBWR2P48146 333 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 TMEM50BP56557 158 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 TMEM33P57088 247 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 MRPS10P82664 201 aaKnown RBP6.33□□□□□ -1.4
CLDN1-202ENST00000490800 SCN1BQ07699 218 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 IL24Q13007 206 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF154Q13106 437 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 MAB21L1Q13394 359 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 FAM189A2Q15884 450 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 RGS21Q2M5E4 152 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF260Q3ZCT1 412 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 CDNFQ49AH0 187 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 PLAC9Q5JTB6 97 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 ELP2Q6IA86 826 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 C11orf53Q8IXP5 236 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 MKXQ8IYA7 352 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 BATF2Q8N1L9 274 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 OSR2Q8N2R0 312 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 SPERTQ8NA61 448 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 SCCPDHQ8NBX0 429 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 CHST4Q8NCG5 386 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 OR56B1Q8NGI3 324 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 AQP3Q92482 292 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 RDH5Q92781 318 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 MRPS24Q96EL2 167 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms