RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
VPS26A-205ENST00000489656 RIMS4Q9H426 269 aaPredicted RBP11.88□□□□□ -0.51
VPS26A-205ENST00000489656 HRASLSQ9HDD0 168 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 C12orf4Q9NQ89 552 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 ZNF222Q9UK12 451 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 EDARQ9UNE0 448 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 WIPI2Q9Y4P8 454 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 DCHS2Q6V1P9 2916 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 LINC00854A0A1B0GVQ3 168 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 UBE2QL1A1L167 161 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 RFPL4AA6NLU0 287 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 OR2AT4A6NND4 320 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 RFPL4AL1F8VTS6 287 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 TMEM178BH3BS89 294 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 SIRPB1O00241 398 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 FSTL3O95633 263 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 CYB5R3P00387 301 aaPredicted RBP11.87□□□□□ -0.51
VPS26A-205ENST00000489656 HPXP02790 462 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 FCGR3AP08637 254 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 AKAIN1P0CW23 69 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 FAUP35544 74 aaKnown RBP11.87□□□□□ -0.51
VPS26A-205ENST00000489656 MRPS11P82912 194 aaKnown RBP11.87□□□□□ -0.51
VPS26A-205ENST00000489656 MRPS15P82914 257 aaKnown RBP11.87□□□□□ -0.51
VPS26A-205ENST00000489656 PAX5Q02548 391 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 TRIM16LQ309B1 348 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 ACTBL2Q562R1 376 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 PAN3Q58A45 887 aaKnown RBP11.87□□□□□ -0.51
VPS26A-205ENST00000489656 STUMQ69YW2 141 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 BRICD5Q6PL45 260 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 C20orf204Q6ZNR8 217 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 DCDC5Q6ZRR9 648 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 Q6ZS49 121 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 GDPD3Q7L5L3 318 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 CENPSQ8N2Z9 138 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 GVQW1Q8N7I0 195 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 ANGPTL6Q8NI99 470 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 SNAPC3Q92966 411 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 VRK1Q99986 396 aaPredicted RBP11.87□□□□□ -0.51
VPS26A-205ENST00000489656 UBTD1Q9HAC8 227 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 TMEM106BQ9NUM4 274 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 OR14J1Q9UGF5 321 aa11.87□□□□□ -0.51
VPS26A-205ENST00000489656 IGHV1-69-2A0A0G2JMI3 117 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 OOEPA6NGQ2 149 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 ZNF736B4DX44 427 aaPredicted RBP11.86□□□□□ -0.51
VPS26A-205ENST00000489656 H7C1Q1 480 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 LGALS8O00214 317 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 CSN2P05814 226 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 SLC6A1P30531 599 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 PRDX2P32119 198 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 CD80P33681 288 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 BTCP35070 178 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 HOXA4Q00056 320 aaPredicted RBP11.86□□□□□ -0.51
VPS26A-205ENST00000489656 MEF2DQ14814 521 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 MICBQ29980 383 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 STEAP1BQ6NZ63 245 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 ZNF880Q6PDB4 577 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 NRARPQ7Z6K4 114 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 TGIF2LYQ8IUE0 185 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 CD177Q8N6Q3 437 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 DUSP18Q8NEJ0 188 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 OR4C16Q8NGL9 310 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 IGFBPL1Q8WX77 278 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 RDH5Q92781 318 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 SDSLQ96GA7 329 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
VPS26A-205ENST00000489656 CACNG6Q9BXT2 260 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 DNTTIP1Q9H147 329 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 PLEKHF2Q9H8W4 249 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 ETAA1Q9NY74 926 aa11.86□□□□□ -0.51
VPS26A-205ENST00000489656 TRAV38-1A0A0B4J264 116 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 FAM240BA0A1B0GVZ2 78 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 ZNF737O75373 536 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 CD3DP04234 171 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 COX6B1P14854 86 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
VPS26A-205ENST00000489656 COL10A1Q03692 680 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 HFEQ30201 348 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 PLA1AQ53H76 456 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 ATPAF1Q5TC12 328 aaPredicted RBP11.85□□□□□ -0.51
VPS26A-205ENST00000489656 SP5Q6BEB4 398 aaPredicted RBP11.85□□□□□ -0.51
VPS26A-205ENST00000489656 ZNF497Q6ZNH5 498 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 Q6ZNX1 250 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 C17orf107Q6ZR85 190 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 BOLLQ8N9W6 283 aaKnown RBP11.85□□□□□ -0.51
VPS26A-205ENST00000489656 BEST4Q8NFU0 473 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 ENKURQ8TC29 256 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 NEK7Q8TDX7 302 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 DYRK2Q92630 601 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 TMEM165Q9HC07 324 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 DLL4Q9NR61 685 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 COPZ2Q9P299 210 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 LAMP3Q9UQV4 416 aa11.85□□□□□ -0.51
VPS26A-205ENST00000489656 UTP20O75691 2785 aaKnown RBP11.84□□□□□ -0.51
VPS26A-205ENST00000489656 PPIAL4EA0A075B759 164 aa11.84□□□□□ -0.51
VPS26A-205ENST00000489656 IGHV3OR15-7A0A075B7D8 119 aa11.84□□□□□ -0.51
VPS26A-205ENST00000489656 TMEM82A0PJX8 343 aa11.84□□□□□ -0.51
VPS26A-205ENST00000489656 PPIAL4DF5H284 164 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms