RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 EPHA2P29317 976 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 PTGFRP43088 359 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 SCN1BQ07699 218 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 CCDC144NLQ6NUI1 221 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 FAHD1Q6P587 224 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 SPATA24Q86W54 205 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 PRSS35Q8N3Z0 413 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 CCDC54Q8NEL0 328 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 CHPT1Q8WUD6 406 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 PP6455Q8WZ26 134 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 ADAT3Q96EY9 351 aaPredicted RBP13.41□□□□□ -0.26
TOP3B-217ENST00000489581 ZFP57Q9NU63 452 aa13.41□□□□□ -0.26
TOP3B-217ENST00000489581 SORL1Q92673 2214 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 IGKV1-12A0A0C4DH73 117 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 ODAMA1E959 279 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 SERPINE3A8MV23 424 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 OOSP1A8MZH6 123 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 MITFO75030 526 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-217ENST00000489581 IGKV1D-12P01611 117 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 IGHV3-7P01780 117 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 ZNF44P15621 663 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 HOXB6P17509 224 aaKnown RBP13.4□□□□□ -0.26
TOP3B-217ENST00000489581 ATF1P18846 271 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 KIR3DL2P43630 455 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 RAB25P57735 213 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 PDZK1IP1Q13113 114 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 HES1Q14469 280 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 HNF4GQ14541 408 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 THNSL2Q86YJ6 484 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 C5orf56Q8N8D9 126 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 OR56B4Q8NH76 319 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 TOMM40LQ969M1 308 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 RPEQ96AT9 228 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 C10orf35Q96D05 121 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 COQ2Q96H96 371 aa13.4□□□□□ -0.26
TOP3B-217ENST00000489581 ZMAT5Q9UDW3 170 aaKnown RBP13.4□□□□□ -0.26
TOP3B-217ENST00000489581 STAB2Q8WWQ8 2551 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 A0A087X0M5 115 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 A0A1B0GX30 115 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 FAM107AO95990 144 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 PRKACBP22694 351 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 C17orf58Q2M2W7 97 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 C12orf73Q69YU5 71 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 LHFPL2Q6ZUX7 228 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 GID4Q8IVV7 300 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 OR10H4Q8NGA5 316 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 OR9G1Q8NH87 305 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 FGGYQ96C11 551 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 NRBF2Q96F24 287 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 SPACA5Q96QH8 159 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 PRR25Q96S07 402 aa13.39□□□□□ -0.27
TOP3B-217ENST00000489581 ZNF729A6NN14 1252 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-217ENST00000489581 ZAR1LA6NP61 321 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 RAMP3O60896 148 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 SULT1C4O75897 302 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 OR2T7P0C7T2 308 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 TMEM11P17152 192 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 SLC6A1P30531 599 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 DIAPH2-AS1Q14236 149 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 ATXN7L3Q14CW9 347 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-217ENST00000489581 NKAPLQ5M9Q1 402 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 Q6P435 159 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 ZNF695Q8IW36 515 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 DRAM1Q8N682 238 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 OR5D18Q8NGL1 313 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 LEAP2Q969E1 77 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 RAX2Q96IS3 184 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 KIRREL1Q96J84 757 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 ASCL2Q99929 193 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 COMMD4Q9H0A8 199 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 PPIL3Q9H2H8 161 aaKnown RBP13.38□□□□□ -0.27
TOP3B-217ENST00000489581 KRT84Q9NSB2 600 aa13.38□□□□□ -0.27
TOP3B-217ENST00000489581 WARS2Q9UGM6 360 aaKnown RBP13.38□□□□□ -0.27
TOP3B-217ENST00000489581 LSM4Q9Y4Z0 139 aaKnown RBP13.38□□□□□ -0.27
TOP3B-217ENST00000489581 CCL24O00175 119 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 SLC33A1O00400 549 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-217ENST00000489581 KDM4BO94953 1096 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 OCM2P0CE71 109 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 OCMP0CE72 109 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-217ENST00000489581 UBCP0CG48 685 aaKnown RBP13.37□□□□□ -0.27
TOP3B-217ENST00000489581 ZNF20P17024 532 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 LUMP51884 338 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-217ENST00000489581 SLC35B1P78383 322 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 BNIP1Q12981 228 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 FLOT2Q14254 428 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 TP53I3Q53FA7 332 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 UTS2BQ765I0 119 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 SLC35E3Q7Z769 313 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 OPALINQ96PE5 141 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 PCDHB16Q9NRJ7 776 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 GNG8Q9UK08 70 aa13.37□□□□□ -0.27
TOP3B-217ENST00000489581 AMMECR1Q9Y4X0 333 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-217ENST00000489581 KBTBD11-OT1A0A1B0GTJ5 212 aa13.36□□□□□ -0.27
TOP3B-217ENST00000489581 A0A1W2PPI3 338 aa13.36□□□□□ -0.27
TOP3B-217ENST00000489581 TCRBV3S1A0A5B6 114 aa13.36□□□□□ -0.27
TOP3B-217ENST00000489581 LINC01548A6NM66 108 aa13.36□□□□□ -0.27
TOP3B-217ENST00000489581 J3QR06 171 aa13.36□□□□□ -0.27
TOP3B-217ENST00000489581 DEGS1O15121 323 aa13.36□□□□□ -0.27
TOP3B-217ENST00000489581 FGF16O43320 207 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms