RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 PRDX4Q13162 271 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 TBC1D28Q2M2D7 210 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 C6orf183Q5T699 404 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 ZNF660Q6AZW8 331 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 THOC7Q6I9Y2 204 aaKnown RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 SIGIRRQ6IA17 410 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 CLEC18BQ6UXF7 455 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 FBXW12Q6X9E4 464 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 C6orf201Q7Z4U5 140 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 SGPP2Q8IWX5 399 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 Q8IYB0 196 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 EIF4E3Q8N5X7 224 aaKnown RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 LRTM2Q8N967 370 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 OR10AD1Q8NGE0 317 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 OR5M9Q8NGP3 310 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 FGFBP3Q8TAT2 258 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 PPP1R1CQ8WVI7 109 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 PIGCQ92535 297 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 TMEM230Q96A57 120 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 SARAFQ96BY9 339 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 SNRNP40Q96DI7 357 aaKnown RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 SLX1AQ9BQ83 275 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 SYT3Q9BQG1 590 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 RTBDNQ9BSG5 229 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 PAPOLGQ9BWT3 736 aaKnown RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 SUCNR1Q9BXA5 334 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 CHMP1AQ9HD42 196 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 OBP2BQ9NPH6 170 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 ZNF701Q9NV72 531 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 LUZP4Q9P127 313 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 RCC2Q9P258 522 aaKnown RBP7.26□□□□□ -1.25
VTI1A-207ENST00000489357 CLCF1Q9UBD9 225 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 DNAJB11Q9UBS4 358 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 KCNIP3Q9Y2W7 256 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 SESN1Q9Y6P5 492 aa7.26□□□□□ -1.25
VTI1A-207ENST00000489357 UBR5O95071 2799 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 SPTAN1Q13813 2472 aaKnown RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 TRBV6-6A0A0A6YYG2 114 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 IGKV1-12A0A0C4DH73 117 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 KIR2DS1A0A191URI9 304 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 CRYM-AS1A6NIL9 109 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 ZNF850A8MQ14 1090 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 H7C1Q1 480 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 SIX6O95475 246 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 DIRAS3O95661 229 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 IL18BPO95998 194 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 IGKV1D-12P01611 117 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 HLA-HP01893 362 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 ACAA1P09110 424 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 PATE4P0C8F1 98 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 OR5H8P0DN80 308 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 CD79AP11912 226 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 RPS2P15880 293 aaKnown RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 NUP62P37198 522 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 RBMXP38159 391 aaKnown RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 RFC3P40938 356 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 GLP1RP43220 463 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 KIR2DS4P43632 304 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 NPY4RP50391 375 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 GNG3P63215 75 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 EIF5AP63241 154 aaKnown RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 SUPT4H1P63272 117 aaKnown RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 RBM39Q14498 530 aaKnown RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 IL13RA2Q14627 380 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 KIR2DS1Q14954 304 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 GUSBP1Q15486 140 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 IGFBP7Q16270 282 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 GABRA6Q16445 453 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 TAF9Q16594 264 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 TFAP2EQ6VUC0 442 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 C17orf107Q6ZR85 190 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 Q6ZT83 130 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 FAM214BQ7L5A3 538 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 REC114Q7Z4M0 266 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 SLC38A6Q8IZM9 456 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 FBXL14Q8N1E6 418 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 C17orf78Q8N4C9 275 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 FAM169BQ8N8A8 192 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 CCDC71LQ8N9Z2 235 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 ADAD2Q8NCV1 583 aaKnown RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 OR56B2PQ8NGI1 322 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 OR10K1Q8NGX5 313 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 STOML3Q8TAV4 291 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 EAF1Q96JC9 268 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 C2orf50Q96LR7 162 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 TREM2Q9NZC2 230 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 SPRR3Q9UBC9 169 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 AK3Q9UIJ7 227 aa7.25□□□□□ -1.25
VTI1A-207ENST00000489357 USP9XQ93008 2570 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-207ENST00000489357 TEX13DA0A0J9YY54 714 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-207ENST00000489357 CLEC18AA5D8T8 446 aa7.24□□□□□ -1.25
VTI1A-207ENST00000489357 RNF222A6NCQ9 220 aa7.24□□□□□ -1.25
VTI1A-207ENST00000489357 C5orf51A6NDU8 294 aa7.24□□□□□ -1.25
VTI1A-207ENST00000489357 CD300LBA8K4G0 201 aa7.24□□□□□ -1.25
VTI1A-207ENST00000489357 NUDT19A8MXV4 375 aa7.24□□□□□ -1.25
VTI1A-207ENST00000489357 AHRRA9YTQ3 701 aa7.24□□□□□ -1.25
VTI1A-207ENST00000489357 TRAPPC2LH3BP13 241 aa7.24□□□□□ -1.25
VTI1A-207ENST00000489357 TAAR5O14804 337 aa7.24□□□□□ -1.25
VTI1A-207ENST00000489357 GEMIN2O14893 280 aaKnown RBP7.24□□□□□ -1.25
VTI1A-207ENST00000489357 SHOXO15266 292 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms