RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PRTN3P24158 256 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 STC1P52823 247 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 RAB8AP61006 207 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 RHOAP61586 193 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 FUT5Q11128 374 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 FAM104BQ5XKR9 115 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 MED27Q6P2C8 311 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 ZNF773Q6PK81 442 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 CLEC18BQ6UXF7 455 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 DGAT2L6Q6ZPD8 337 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 FUNDC1Q8IVP5 155 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 ATP6V1C2Q8NEY4 427 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 OR2K2Q8NGT1 345 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 THTPAQ9BU02 230 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 ZNF717Q9BY31 904 aaPredicted RBP2.49□□□□□ -2.01
XRN1-213ENST00000489241 ING2Q9H160 280 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 ZNF835Q9Y2P0 537 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 TMEM131Q92545 1883 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 SETD1AO15047 1707 aaKnown RBP2.48□□□□□ -2.01
XRN1-213ENST00000489241 NUP153P49790 1475 aaKnown RBP2.48□□□□□ -2.01
XRN1-213ENST00000489241 A8MUU9 505 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 C8orf87E5RJ46 101 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 KLRC4-KLRK1H3BQV0 150 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 K7EM74 188 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 GPR171O14626 319 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 FGF16O43320 207 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 ENTPD6O75354 484 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 CXorf1O96002 111 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 ORM1P02763 201 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 OR5AC1P0C628 307 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 ZNF286BP0CG31 522 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 PET100P0DJ07 73 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 SPNP16150 400 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 SLC6A1P30531 599 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 TMEM241Q24JQ0 296 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 FAM162BQ5T6X4 162 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 SLC25A34Q6PIV7 304 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 PLEKHG7Q6ZR37 379 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 NT5DC3Q86UY8 548 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 ZIC4Q8N9L1 334 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 GATD1Q8NB37 220 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 LFNGQ8NES3 379 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 DDI1Q8WTU0 396 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 ITLN2Q8WWU7 325 aaPredicted RBP2.48□□□□□ -2.01
XRN1-213ENST00000489241 PPWD1Q96BP3 646 aaKnown RBP2.48□□□□□ -2.01
XRN1-213ENST00000489241 PPP1R36Q96LQ0 422 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 ANAPC13Q9BS18 74 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 SLC19A3Q9BZV2 496 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 FBXL15Q9H469 300 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 IL37Q9NZH6 218 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 PSMD13Q9UNM6 376 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 NOS1P29475 1434 aa2.48□□□□□ -2.01
XRN1-213ENST00000489241 COL4A4P53420 1690 aaPredicted RBP2.47□□□□□ -2.01
XRN1-213ENST00000489241 RPRD2Q5VT52 1461 aaKnown RBP2.47□□□□□ -2.01
XRN1-213ENST00000489241 TRAV8-2A0A0B4J237 113 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 TRAV40A0A0B4J280 105 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 GOLGA6L10A6NI86 522 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.47□□□□□ -2.01
XRN1-213ENST00000489241 RPL36A-HNRNPH2H7BZ11 118 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 K7EPK0 472 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 UGT2B11O75310 529 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 EPPINO95925 133 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 IGHV1-46P01743 117 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 SCGB1C2P0DMR2 95 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 MPV17P39210 176 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 TGM4P49221 684 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 PSMD7P51665 324 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 EMP2P54851 167 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 DLX6P56179 175 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 RAB25P57735 213 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 EXOC3L4Q17RC7 722 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 HSP90B2PQ58FF3 399 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 CLEC20AQ6ZU45 233 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 MARCH3Q86UD3 253 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 APCDD1LQ8NCL9 501 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 OR2M3Q8NG83 312 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 SUN5Q8TC36 379 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 SCGB1C1Q8TD33 95 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 TWIST2Q8WVJ9 160 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 LINC00477Q96M19 166 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 OLFM3Q96PB7 478 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 PEBP4Q96S96 227 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 ZNF426Q9BUY5 554 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 OR51E2Q9H255 320 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 FAM60AQ9NP50 221 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 PCM1Q15154 2024 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 RAB3GAP2Q9H2M9 1393 aa2.47□□□□□ -2.01
XRN1-213ENST00000489241 IGHV2-26A0A0B4J1V2 119 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 IZUMO1RA6ND01 250 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 EFCAB9A8MZ26 197 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 C16orf90A8MZG2 172 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 TCF21O43680 179 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 CNMDO75829 334 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 CDRT1O95170 752 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 PVALBP20472 110 aaPredicted RBP2.46□□□□□ -2.02
XRN1-213ENST00000489241 ELK4P28324 431 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 NUDT2P50583 147 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 C1QTNF8P60827 252 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 NXNL2Q5VZ03 156 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 TMEM215Q68D42 235 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms