RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 A0A1B0GW55 424 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 hADV38S2A0JD32 116 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 C22orf46C9J442 243 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 M0R1W7 72 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 AIREO43918 545 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 CRTAPO75718 401 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-206ENST00000489230 TOX4O94842 621 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 CSN2P05814 226 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 DUX4L2P0CJ85 424 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 DUX4L3P0CJ86 424 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 DUX4L4P0CJ87 422 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 DUX4L5P0CJ88 424 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 DUX4L6P0CJ89 424 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 DUX4L7P0CJ90 424 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 CEBPDP49716 269 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-206ENST00000489230 SNU13P55769 128 aaKnown RBP10.28□□□□□ -0.76
COL4A5-206ENST00000489230 RBM11P57052 281 aaKnown RBP10.28□□□□□ -0.76
COL4A5-206ENST00000489230 RBM39Q14498 530 aaKnown RBP10.28□□□□□ -0.76
COL4A5-206ENST00000489230 PDCD1Q15116 288 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 DUX4L9Q6RFH8 374 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-206ENST00000489230 C17orf107Q6ZR85 190 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 OR2W3Q7Z3T1 314 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 CROCCP3Q8IVE0 287 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 CHCHD6Q9BRQ6 235 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 OR51E2Q9H255 320 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 NCOR1P1Q9H4R4 102 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 DUX4Q9UBX2 424 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
COL4A5-206ENST00000489230 MXRA5Q9NR99 2828 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 LOC100506127A0A0U1RQW1 187 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 TMEM82A0PJX8 343 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 IFITM5A6NNB3 132 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 MCRIP1C9JLW8 97 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 SIRPB1O00241 398 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 SLC33A1O00400 549 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-206ENST00000489230 OR7C1O76099 320 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-206ENST00000489230 TFF1P04155 84 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 MGMTP16455 207 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 SRD5A1P18405 259 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 GADD45AP24522 165 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 FPR2P25090 351 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 CFPP27918 469 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 EDDM3BP56851 147 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 ARF6P62330 175 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 TMEM200BQ69YZ2 307 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 ZNF565Q8N9K5 539 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 UPRTQ96BW1 309 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 YIPF6Q96EC8 236 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 WDFY2Q96P53 400 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 URM1Q9BTM9 101 aaKnown RBP10.27□□□□□ -0.77
COL4A5-206ENST00000489230 SELENOIQ9C0D9 397 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 ONECUT1Q9UBC0 465 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 IL36RNQ9UBH0 155 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 FBLN5Q9UBX5 448 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 STEAP1Q9UHE8 339 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 OPN4Q9UHM6 478 aa10.27□□□□□ -0.77
COL4A5-206ENST00000489230 DOCK11Q5JSL3 2073 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 NOTOA8MTQ0 251 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 GEMIN2O14893 280 aaKnown RBP10.26□□□□□ -0.77
COL4A5-206ENST00000489230 PSPNO60542 156 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 CA11O75493 328 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 FCN3O75636 299 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 FAM157CP0CG43 387 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 SELLP14151 372 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 FUT3P21217 361 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 P2RX3P56373 397 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 PAX5Q02548 391 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 TAF9Q16594 264 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 C2orf76Q3KRA6 126 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 PIGYQ3MUY2 71 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 PAN3Q58A45 887 aaKnown RBP10.26□□□□□ -0.77
COL4A5-206ENST00000489230 ATAD3CQ5T2N8 411 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 FAM185AQ8N0U4 392 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 OR4S1Q8NGB4 309 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 OR13F1Q8NGS4 319 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 CORO2AQ92828 525 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 SLC25A28Q96A46 364 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 FAM3DQ96BQ1 224 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 C1orf147Q96MC9 270 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-206ENST00000489230 DPCDQ9BVM2 203 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-206ENST00000489230 METTL8Q9H825 291 aaKnown RBP10.26□□□□□ -0.77
COL4A5-206ENST00000489230 OR6C3Q9NZP0 311 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 RAB22AQ9UL26 194 aa10.26□□□□□ -0.77
COL4A5-206ENST00000489230 UBE2J1Q9Y385 318 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-206ENST00000489230 TRGV10A0A0A0MS01 117 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 TRAV24A0A0B4J272 114 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 AIPO00170 330 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 MPIG6BO95866 241 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 AVPP01185 164 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 RBP4P02753 201 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 VSIG8P0DPA2 414 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 GZMHP20718 246 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 PRTN3P24158 256 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 SDC2P34741 201 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 OR3A1P47881 315 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 RPS27AP62979 156 aaKnown RBP10.25□□□□□ -0.77
COL4A5-206ENST00000489230 GUCA2AQ02747 115 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 KRBOX4Q5JUW0 171 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 GPR157Q5UAW9 335 aa10.25□□□□□ -0.77
COL4A5-206ENST00000489230 NCR3LG1Q68D85 454 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms