RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PITPNC1Q9UKF7 332 aa18.54■□□□□ 0.56
COL9A3-213ENST00000489045 FUOMA2VDF0 154 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 SLC33A1O00400 549 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-213ENST00000489045 CSN2P05814 226 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 CSF1P09603 554 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 SOX2P48431 317 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 ETV1P50549 477 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 DYNLT3P51808 116 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 SLC34A1Q06495 639 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 HABP2Q14520 560 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-213ENST00000489045 CDK5R1Q15078 307 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 XAF1Q6GPH4 301 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 DTX3Q8N9I9 347 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 CNIH3Q8TBE1 160 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 CORO2AQ92828 525 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 COQ2Q96H96 371 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 ING3Q9NXR8 418 aa18.53■□□□□ 0.56
COL9A3-213ENST00000489045 ODAMA1E959 279 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 F2RL2O00254 374 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 DEGS1O15121 323 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 CLIC3O95833 236 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 VSIG10L2P0DP72 767 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 RAB3AP20336 220 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 CDK2P24941 298 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 MTNR1BP49286 362 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 ATXN7L3Q14CW9 347 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-213ENST00000489045 PDLIM3Q53GG5 364 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-213ENST00000489045 KRBOX4Q5JUW0 171 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 HEPN1Q6WQI6 88 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 OR51A2Q8NGJ7 313 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 OR4P4Q8NGL7 312 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 CFHR4Q92496 578 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 CPNE2Q96FN4 548 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-213ENST00000489045 TAS2R4Q9NYW5 299 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 TAS2R3Q9NYW6 316 aa18.52■□□□□ 0.56
COL9A3-213ENST00000489045 FAM172BPA6NC97 362 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 GABRPO00591 440 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 HTR1DP28221 377 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 GDNFP39905 211 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 OR2G6Q5TZ20 316 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 OR52W1Q6IF63 320 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 ZNF529Q6P280 563 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 RPL22L1Q6P5R6 122 aaKnown RBP18.51■□□□□ 0.55
COL9A3-213ENST00000489045 Q8N2B8 174 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 ABHD12Q8N2K0 398 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 GPR148Q8TDV2 347 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 GPER1Q99527 375 aa18.51■□□□□ 0.55
COL9A3-213ENST00000489045 TGP01266 2768 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 MAGEB3O15480 346 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 DCKP27707 260 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 PTGFRP43088 359 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 LRRC36Q1X8D7 754 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 CCDC58Q4VC31 144 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 ELP2Q6IA86 826 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 TMPRSS11AQ6ZMR5 421 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 SATL1Q86VE3 508 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 PXT1Q8NFP0 134 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 TNFAIP8L1Q8WVP5 186 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 CYGBQ8WWM9 190 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 NR1H4Q96RI1 486 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-213ENST00000489045 PPIL3Q9H2H8 161 aaKnown RBP18.5■□□□□ 0.55
COL9A3-213ENST00000489045 SERTAD4Q9NUC0 356 aa18.5■□□□□ 0.55
COL9A3-213ENST00000489045 H0YJX3 145 aa18.49■□□□□ 0.55
COL9A3-213ENST00000489045 HSPB6O14558 160 aa18.49■□□□□ 0.55
COL9A3-213ENST00000489045 CD2P06729 351 aa18.49■□□□□ 0.55
COL9A3-213ENST00000489045 RTN4RL2Q86UN3 420 aa18.49■□□□□ 0.55
COL9A3-213ENST00000489045 PRSS22Q9GZN4 317 aa18.49■□□□□ 0.55
COL9A3-213ENST00000489045 FAM192AQ9GZU8 254 aa18.49■□□□□ 0.55
COL9A3-213ENST00000489045 ZNF286AQ9HBT8 521 aa18.49■□□□□ 0.55
COL9A3-213ENST00000489045 DPM3Q9P2X0 92 aa18.49■□□□□ 0.55
COL9A3-213ENST00000489045 IRGMA1A4Y4 181 aa18.48■□□□□ 0.55
COL9A3-213ENST00000489045 CD34P28906 385 aa18.48■□□□□ 0.55
COL9A3-213ENST00000489045 BDH1Q02338 343 aa18.48■□□□□ 0.55
COL9A3-213ENST00000489045 OR4D6Q8NGJ1 314 aa18.48■□□□□ 0.55
COL9A3-213ENST00000489045 OR10K1Q8NGX5 313 aa18.48■□□□□ 0.55
COL9A3-213ENST00000489045 ZNF596Q8TC21 504 aa18.48■□□□□ 0.55
COL9A3-213ENST00000489045 TMEM106AQ96A25 262 aa18.48■□□□□ 0.55
COL9A3-213ENST00000489045 SIRT4Q9Y6E7 314 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-213ENST00000489045 ZNF729A6NN14 1252 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-213ENST00000489045 FAM90A22PA8MWA6 464 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 IGLV1-47P01700 117 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 MYL12AP19105 171 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 OR3A4PP47883 348 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 IL13RA2Q14627 380 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 RSU1Q15404 277 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 C17orf58Q2M2W7 97 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 PAN3Q58A45 887 aaKnown RBP18.47■□□□□ 0.55
COL9A3-213ENST00000489045 TTC23Q5W5X9 447 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 OR51T1Q8NGJ9 327 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 OR6C3Q9NZP0 311 aa18.47■□□□□ 0.55
COL9A3-213ENST00000489045 DIMT1Q9UNQ2 313 aaKnown RBP18.47■□□□□ 0.55
COL9A3-213ENST00000489045 EXOSC1Q9Y3B2 195 aaKnown RBP18.47■□□□□ 0.55
COL9A3-213ENST00000489045 TRAV24A0A0B4J272 114 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 LALBAP00709 142 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 GLP1RP43220 463 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 BLCAPP62952 87 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 PIGYQ3MUY2 71 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 ARSJQ5FYB0 599 aaPredicted RBP18.46■□□□□ 0.55
COL9A3-213ENST00000489045 Q6ZS46 218 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 SETD9Q8NE22 299 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms