RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 PCGF1Q9BSM1 259 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 DCTN5Q9BTE1 182 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 C19orf24Q9BVV8 132 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 WDR13Q9H1Z4 485 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 PPP1R3EQ9H7J1 279 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 METTL8Q9H825 291 aaKnown RBP4.21□□□□□ -1.74
SF3A3-207ENST00000488934 HES4Q9HCC6 221 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 AMBNQ9NP70 447 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 NOX4Q9NPH5 578 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 SNTG1Q9NSN8 517 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 ONECUT1Q9UBC0 465 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 CKLFQ9UBR5 152 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 ERGIC3Q9Y282 383 aa4.21□□□□□ -1.74
SF3A3-207ENST00000488934 SVEP1Q4LDE5 3571 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 DSCAML1Q8TD84 2053 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 IGKV1D-17A0A075B6S4 117 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 FUOMA2VDF0 154 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 BTBD17A6NE02 478 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 ERICH4A6NGS2 130 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 A6NIN4 97 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 RFPL4AA6NLU0 287 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 OR4C45A6NMZ5 311 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 RFPL4AL1F8VTS6 287 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 H0YIZ8 118 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 CLDN34H7C241 214 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 WBP4O75554 376 aaKnown RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 RBP4P02753 201 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 HCKP08631 526 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 IL6RP08887 468 aaPredicted RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 LIMS3P0CW19 117 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 LIMS4P0CW20 117 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 MMP9P14780 707 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 RAB3AP20336 220 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 PRTN3P24158 256 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 MAPK3P27361 379 aaPredicted RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 PRDX2P32119 198 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 POU3F4P49335 361 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 UCP3P55916 312 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 RPL15P61313 204 aaKnown RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 ERVK11-1P61568 191 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 RPL31P62899 125 aaKnown RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 ELF3P78545 371 aaPredicted RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 ADARB1P78563 741 aaKnown RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 BDH1Q02338 343 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 ACSM1Q08AH1 577 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 HNRNPA0Q13151 305 aaKnown RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 CDK5R1Q15078 307 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 UBE2V2Q15819 145 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 KRTAP24-1Q3LI83 254 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 YIF1BQ5BJH7 314 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 GDPD3Q7L5L3 318 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 CALHM1Q8IU99 346 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 OR8H2Q8N162 312 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 STX19Q8N4C7 294 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 PARP16Q8N5Y8 322 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 TMEM86BQ8N661 226 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 ASCC1Q8N9N2 400 aaKnown RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 CHST4Q8NCG5 386 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 ZNRF1Q8ND25 227 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 LY6G5BQ8NDX9 201 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 OR5T2Q8NGG2 359 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 OR13C9Q8NGT0 318 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 EMG1Q92979 244 aaKnown RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 FGGYQ96C11 551 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 SMIM19Q96E16 107 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 S100A13Q99584 98 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 DPCDQ9BVM2 203 aaPredicted RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 ISG20L2Q9H9L3 353 aaKnown RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 SEBOXQ9HB31 216 aaPredicted RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 PCDHB16Q9NRJ7 776 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 PLCXD1Q9NUJ7 323 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 PAK1IP1Q9NWT1 392 aaPredicted RBP4.2□□□□□ -1.74
SF3A3-207ENST00000488934 BABAM2Q9NXR7 383 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 SCN3BQ9NY72 215 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 POMT1Q9Y6A1 747 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 CUBNO60494 3623 aa4.2□□□□□ -1.74
SF3A3-207ENST00000488934 IGHV1-69DA0A0B4J2H0 117 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 DNAJC9-AS1A6NH13 148 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 H3BSH0 61 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 K7N7A8 449 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 SH2D1BO14796 132 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 SYNGR1O43759 233 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 ZNF780AO75290 641 aaPredicted RBP4.19□□□□□ -1.74
SF3A3-207ENST00000488934 VENTXO95231 258 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 CLIC3O95833 236 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 HAND1O96004 215 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 PAHP00439 452 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 IGHV1-69P01742 117 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 TK1P04183 234 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 CRYBA1P05813 215 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 SFTPBP07988 381 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 FBP1P09467 338 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 RBMXP38159 391 aaKnown RBP4.19□□□□□ -1.74
SF3A3-207ENST00000488934 RANBP1P43487 201 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 WNT4P56705 351 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 ARF6P62330 175 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 UBA52P62987 128 aaKnown RBP4.19□□□□□ -1.74
SF3A3-207ENST00000488934 MEF2CQ06413 473 aaPredicted RBP4.19□□□□□ -1.74
SF3A3-207ENST00000488934 ST3GAL4Q11206 333 aa4.19□□□□□ -1.74
SF3A3-207ENST00000488934 PDZK1IP1Q13113 114 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms