RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 OR2T10Q8NGZ9 312 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 HAVCR2Q8TDQ0 301 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 ARPC1AQ92747 370 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 LEAP2Q969E1 77 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 EAF1Q96JC9 268 aaPredicted RBP7.17□□□□□ -1.26
COL17A1-207ENST00000488320 TMED9Q9BVK6 235 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 OR51J1Q9H342 316 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 IL1RAPQ9NPH3 570 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 SAR1AQ9NR31 198 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 CMC2Q9NRP2 79 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 KRT84Q9NSB2 600 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 ACTR3BQ9P1U1 418 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 IL36RNQ9UBH0 155 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 KLHDC2Q9Y2U9 406 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 DNAH10Q8IVF4 4471 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 A0A087X0M5 115 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 IGHV3-72A0A0B4J1Y9 119 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 A0A1B0GX30 115 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 ZNF729A6NN14 1252 aaPredicted RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 LINC01619G3V211 115 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 TNFRSF11BO00300 401 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 EDF1O60869 148 aaKnown RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 E2F6O75461 281 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 KRT36O76013 467 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 CCNB2O95067 398 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 IGLV3-1P01715 115 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 GAPDHP04406 335 aaKnown RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 SOX6P35712 828 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 GNG10P50151 68 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 FUT6P51993 359 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 RIDAP52758 137 aaKnown RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 ZP1P60852 638 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 CDC42P60953 191 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 RPS7P62081 194 aaKnown RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 RUNX1Q01196 453 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 CFHR3Q02985 330 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 LTC4SQ16873 150 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 ZNF829Q3KNS6 432 aaPredicted RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 KRBOX4Q5JUW0 171 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 UTF1Q5T230 341 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 DEGS2Q6QHC5 323 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 HAPLN4Q86UW8 402 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 ANKRD13BQ86YJ7 626 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 Q8N9W7 124 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 OR14K1Q8NGZ2 314 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 GATAD1Q8WUU5 269 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 FAM110AQ9BQ89 295 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 BTBD10Q9BSF8 475 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 RSRP1Q9BUV0 290 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 ELOVL1Q9BW60 279 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 KLK15Q9H2R5 256 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 SEBOXQ9HB31 216 aaPredicted RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 RETNQ9HD89 108 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 EXOSC4Q9NPD3 245 aaKnown RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 NUFIP1Q9UHK0 495 aaKnown RBP7.16□□□□□ -1.26
COL17A1-207ENST00000488320 RAB21Q9UL25 225 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 GSTK1Q9Y2Q3 226 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 V9GYS6 101 aa7.16□□□□□ -1.26
COL17A1-207ENST00000488320 TNCP24821 2201 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 ODAMA1E959 279 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 C12orf77C9JDV5 145 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 HSPA12AO43301 675 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 FSTP19883 344 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 ALOX5APP20292 161 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 BCL3P20749 454 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 NPBWR2P48146 333 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 REG1BP48304 166 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 EBI3Q14213 229 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 ZNF146Q15072 292 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 C17orf58Q2M2W7 97 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 PGAM4Q8N0Y7 254 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 ZNF565Q8N9K5 539 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 AQP11Q8NBQ7 271 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 TEX47Q8TBZ9 253 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 BORCS8Q96FH0 119 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 S1PR3Q99500 378 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 HSPB9Q9BQS6 159 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 CHCHD6Q9BRQ6 235 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 ST6GALNAC5Q9BVH7 336 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 TTTY10Q9BZA0 68 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 ALX4Q9H161 411 aaPredicted RBP7.15□□□□□ -1.26
COL17A1-207ENST00000488320 EFCAB1Q9HAE3 211 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 PLEKHA1Q9HB21 404 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 RBFOX1Q9NWB1 397 aaKnown RBP7.15□□□□□ -1.26
COL17A1-207ENST00000488320 KIAA1456Q9P272 454 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 IKZF2Q9UKS7 526 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 COPS3Q9UNS2 423 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 PSG11Q9UQ72 335 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 WSB1Q9Y6I7 421 aa7.15□□□□□ -1.26
COL17A1-207ENST00000488320 IGKV1-27A0A075B6S5 117 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 IGHV1-3A0A0C4DH29 117 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 KBTBD11-OT1A0A1B0GTJ5 212 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 A0A1W2PPE3 182 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 LOC110117498-PIK3R3F6TDL0 507 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 H3BN98 237 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 HSD17B6O14756 317 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 ENTPD6O75354 484 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 ZNF254O75437 659 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 OR2H2O95918 312 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 SERPINA3P01011 423 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms