RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 OR2C1O95371 312 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 GNB3P16520 340 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 FPR2P25090 351 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 RPL12P30050 165 aaKnown RBP11.86□□□□□ -0.51
COPS7B-221ENST00000488111 NDUFA6P56556 154 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 S100A10P60903 97 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 SPCS3P61009 180 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 GLO1Q04760 184 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 ACTBL2Q562R1 376 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 DNM1P34Q6PK57 102 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 P4HA3Q7Z4N8 544 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 FAM219AQ8IW50 185 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 RNASE11Q8TAA1 199 aaKnown RBP11.86□□□□□ -0.51
COPS7B-221ENST00000488111 MUCL1Q96DR8 90 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 METTL8Q9H825 291 aaKnown RBP11.86□□□□□ -0.51
COPS7B-221ENST00000488111 CNTD2Q9H8S5 307 aa11.86□□□□□ -0.51
COPS7B-221ENST00000488111 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
COPS7B-221ENST00000488111 CXorf65A6NEN9 183 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 DANCRP0C864 163 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 PAX1P15863 534 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 DDTP30046 118 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 PKIAP61925 76 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 LY6DQ14210 128 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 ZNF324BQ6AW86 544 aaPredicted RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 SLC25A47Q6Q0C1 308 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 UBAC2Q8NBM4 344 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 TMEM54Q969K7 222 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 S100PBPQ96BU1 408 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 C2orf88Q9BSF0 95 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 RTBDNQ9BSG5 229 aaPredicted RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 RBM24Q9BX46 236 aaKnown RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 CNTNAP3Q9BZ76 1288 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 SLC35B3Q9H1N7 401 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 FOXD3Q9UJU5 478 aaPredicted RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 MEMO1Q9Y316 297 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 TMED3Q9Y3Q3 217 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 IGKV3D-15A0A087WSY6 115 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 MRPL33O75394 65 aaKnown RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 BPNT1O95861 308 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 SPARCP09486 303 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 FCGR2CP31995 323 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 RPS10P46783 165 aaKnown RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 NPY4RP50391 375 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 KCTD18Q6PI47 426 aaPredicted RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 NUFIP2Q7Z417 695 aaKnown RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 C20orf196Q8IYI0 205 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 GCNT2Q8N0V5 402 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 OR10D4PQ8NGN7 298 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 ALKBH3Q96Q83 286 aaPredicted RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 ULBP2Q9BZM5 246 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 EIF5A2Q9GZV4 153 aaKnown RBP11.85□□□□□ -0.51
COPS7B-221ENST00000488111 BCO1Q9HAY6 547 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 LRP12Q9Y561 859 aa11.85□□□□□ -0.51
COPS7B-221ENST00000488111 LOC107986453A0A1B0GWG9 222 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 K7EPK0 472 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 ISG15P05161 165 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 VSIG8P0DPA2 414 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 RPS2P15880 293 aaKnown RBP11.84□□□□□ -0.51
COPS7B-221ENST00000488111 CLINT1Q14677 625 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 RNPS1Q15287 305 aaKnown RBP11.84□□□□□ -0.51
COPS7B-221ENST00000488111 SSX2Q16385 188 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 LBHQ53QV2 105 aaPredicted RBP11.84□□□□□ -0.51
COPS7B-221ENST00000488111 RTN4RL2Q86UN3 420 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 LINC00346Q8IVM7 164 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 FAM71E2Q8N5Q1 922 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 ZNF610Q8N9Z0 462 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 SLC26A10Q8NG04 563 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 C11orf40Q8WZ69 217 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 SCGB3A2Q96PL1 93 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 KCNJ16Q9NPI9 418 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 CLCF1Q9UBD9 225 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 A0A1B0GW64 132 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 H7C1Q1 480 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 LMX1BO60663 402 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 KRTCAP3Q53RY4 240 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 TSPO2Q5TGU0 170 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 CD300LFQ8TDQ1 290 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 PARP12Q9H0J9 701 aaKnown RBP11.84□□□□□ -0.51
COPS7B-221ENST00000488111 CRLF2Q9HC73 371 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 GSKIPQ9P0R6 139 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 FBLN5Q9UBX5 448 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 R4GMQ9 66 aa11.84□□□□□ -0.51
COPS7B-221ENST00000488111 ZNF823P16415 610 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 HSD11B1P28845 292 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 TDGF1P3P51864 188 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 TMEM33P57088 247 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 GAMTQ14353 236 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 ACSF3Q4G176 576 aaPredicted RBP11.83□□□□□ -0.52
COPS7B-221ENST00000488111 LHFPL1Q86WI0 220 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 GPR137CQ8N3F9 429 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 C9orf106Q8NAJ2 232 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 MAFIPQ8WZ33 124 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 TMEM45BQ96B21 275 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 ABHD6Q9BV23 337 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 G6PC2Q9NQR9 355 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 ELOA3CA0A087WX78 387 aaPredicted RBP11.83□□□□□ -0.52
COPS7B-221ENST00000488111 FIGNL2A6NMB9 653 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms