RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 CCRL2O00421 344 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 HMGN4O00479 90 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 LSM1O15116 133 aaKnown RBP3.38□□□□□ -1.87
BRCA1-217ENST00000487825 CFLARO15519 480 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 BCL2L11O43521 198 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 BRI3O95415 125 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 GSTA2P09210 222 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 CST2P09228 141 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 ADORA3P0DMS8 318 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 MUC1P15941 1255 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-217ENST00000487825 CAMLGP49069 296 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 TGM4P49221 684 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 POU3F4P49335 361 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 STX1BP61266 288 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 GABPB1Q06547 395 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-217ENST00000487825 SSX2Q16385 188 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 SYPL1Q16563 259 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 PCK2Q16822 640 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 MICBQ29980 383 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 LIN52Q52LA3 116 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 RFTN2Q52LD8 501 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-217ENST00000487825 BEND6Q5SZJ8 279 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-217ENST00000487825 CST9LP1Q5W188 147 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 LRRC74BQ6ZQY2 392 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 Q6ZR54 194 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 C3orf62Q6ZUJ4 267 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 MKXQ8IYA7 352 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 ANKFN1Q8N957 763 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 OR6Q1Q8NGQ2 317 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 OR5J2Q8NH18 312 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 OR5K1Q8NHB7 308 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 FBXO25Q8TCJ0 367 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 CORO2AQ92828 525 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF414Q96IQ9 312 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 MS4A14Q96JA4 679 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 FAM218AQ96MZ4 157 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 SLC5A7Q9GZV3 580 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 HEXA-AS1Q9H8Q6 139 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 MTHFD2LQ9H903 347 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-217ENST00000487825 PTTG3PQ9NZH4 202 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 TIMM10BQ9Y5J6 103 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 FLG2Q5D862 2391 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-217ENST00000487825 FAT1Q14517 4588 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 IGKV1D-43A0A0B4J1Z2 117 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 H3BQF6 201 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-217ENST00000487825 RHBDL1O75783 438 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 SLC2A10O95528 541 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 MT-ATP6P00846 226 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 IMPDH1P20839 514 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 BGNP21810 368 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 COX7A1P24310 79 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 LAP3P28838 519 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 CAPGP40121 348 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 CDX1P47902 265 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-217ENST00000487825 CAV3P56539 151 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 PCBD1P61457 104 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 ENDOGQ14249 297 aaKnown RBP3.37□□□□□ -1.87
BRCA1-217ENST00000487825 DGUOKQ16854 277 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 STUMQ69YW2 141 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 ETFRF1Q6IPR1 90 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF826PQ6ZT77 177 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 SLC30A8Q8IWU4 369 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 CLECL1Q8IZS7 167 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 DRAM1Q8N682 238 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 OR5L1Q8NGL2 311 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 OR52P1PQ8NH57 321 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 SLC35B4Q969S0 331 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 C12orf43Q96C57 262 aaKnown RBP3.37□□□□□ -1.87
BRCA1-217ENST00000487825 L3HYPDHQ96EM0 354 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 C2orf48Q96LS8 159 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 DNTTIP1Q9H147 329 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 C1orf123Q9NWV4 160 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 TAS2R5Q9NYW4 299 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 RNF150Q9ULK6 438 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 WDR83OSQ9Y284 106 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF443Q9Y2A4 671 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-217ENST00000487825 NDUFAF1Q9Y375 327 aa3.37□□□□□ -1.87
BRCA1-217ENST00000487825 A0A1B0GWA3 101 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 XKRY2A2RUG3 117 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 TMEM114B3SHH9 223 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 C12orf77C9JDV5 145 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 H3BSH0 61 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 PGRMC1O00264 195 aaKnown RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 IMPA2O14732 288 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 RTL8CO15255 209 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 EIF3HO15372 352 aaKnown RBP eCLIP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 RNF13O43567 381 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 SAP30O75446 220 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 LYPLA1O75608 230 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 OR2F2O95006 317 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 OR6A2O95222 327 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 ARG1P05089 322 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 OR8U8P0C7N1 319 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 RBMY1CP0DJD4 496 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 IGHV1-8P0DP01 117 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 HTR2AP28223 471 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 SLC25A1P53007 311 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 SLC35B1P78383 322 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms