RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CAPSLQ8WWF8 208 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 MEGF10Q96KG7 1140 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 FYTTD1Q96QD9 318 aaKnown RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 OR2V2Q96R30 315 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 WDR13Q9H1Z4 485 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 ESRP2Q9H6T0 727 aaKnown RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 ZNF286AQ9HBT8 521 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 GPN1Q9HCN4 374 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 UFSP2Q9NUQ7 469 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 ERRFI1Q9UJM3 462 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SLC33A1O00400 549 aaPredicted RBP7.96□□□□□ -1.13
SF3B1-211ENST00000487698 HSPB6O14558 160 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 WNT9BO14905 357 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 DEGS1O15121 323 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 CREBL2O60519 120 aaPredicted RBP7.96□□□□□ -1.13
SF3B1-211ENST00000487698 IGHV1-46P01743 117 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 ADH4P08319 380 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 CXCL3P19876 107 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 TSPAN5P62079 268 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 TFF3Q07654 80 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 RBM39Q14498 530 aaKnown RBP7.96□□□□□ -1.13
SF3B1-211ENST00000487698 FIP1L1Q6UN15 594 aaKnown RBP7.96□□□□□ -1.13
SF3B1-211ENST00000487698 C17orf107Q6ZR85 190 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 TMEM17Q86X19 198 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 GAPTQ8N292 157 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 OR52B4Q8NGK2 314 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 MARCH1Q8TCQ1 289 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 CCDC107Q8WV48 283 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 RDH5Q92781 318 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 DACT3Q96B18 629 aaPredicted RBP7.96□□□□□ -1.13
SF3B1-211ENST00000487698 Q9N2K0 584 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 DECR2Q9NUI1 292 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 C1orf123Q9NWV4 160 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 ZDHHC8Q9ULC8 765 aa7.96□□□□□ -1.13
SF3B1-211ENST00000487698 ARFGEF3Q5TH69 2177 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 SRRM5B3KS81 715 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.96□□□□□ -1.14
SF3B1-211ENST00000487698 HS3ST1O14792 307 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 SSNA1O43805 119 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 DYSFO75923 2080 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 HAND1O96004 215 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 OR4A8P0C604 315 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 OR4E1P0C645 316 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 ZNF44P15621 663 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 FPR2P25090 351 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 LMO1P25800 156 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 MDH2P40926 338 aaKnown RBP7.96□□□□□ -1.14
SF3B1-211ENST00000487698 EIF2B2P49770 351 aaKnown RBP7.96□□□□□ -1.14
SF3B1-211ENST00000487698 ZNF81P51508 661 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 HOXA4Q00056 320 aaPredicted RBP7.96□□□□□ -1.14
SF3B1-211ENST00000487698 SMIM21Q3B7S5 101 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 FAHD2BQ6P2I3 314 aaPredicted RBP7.96□□□□□ -1.14
SF3B1-211ENST00000487698 ZNF880Q6PDB4 577 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 TMED4Q7Z7H5 227 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 SLC25A42Q86VD7 318 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 MUC20Q8N307 709 aaPredicted RBP7.96□□□□□ -1.14
SF3B1-211ENST00000487698 GALNT11Q8NCW6 608 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 PRR7Q8TB68 274 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 MRPL30Q8TCC3 161 aaKnown RBP7.96□□□□□ -1.14
SF3B1-211ENST00000487698 CA5BP1Q8WTZ4 195 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 LRRC29Q8WV35 223 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 LRRC46Q96FV0 321 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 FAHD2AQ96GK7 314 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 PLPPR2Q96GM1 343 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 LIME1Q9H400 295 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 RIMS4Q9H426 269 aaPredicted RBP7.96□□□□□ -1.14
SF3B1-211ENST00000487698 TANC2Q9HCD6 1990 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 KCNJ16Q9NPI9 418 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 NECAP2Q9NVZ3 263 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 TREM2Q9NZC2 230 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 ZNF69Q9UC07 566 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 NDRG3Q9UGV2 375 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 GPR132Q9UNW8 380 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 NPTNQ9Y639 398 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 ATP23Q9Y6H3 246 aa7.96□□□□□ -1.14
SF3B1-211ENST00000487698 DSCAMO60469 2012 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 MEIKINA0A087WXM9 373 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.95□□□□□ -1.14
SF3B1-211ENST00000487698 OR5H14A6NHG9 310 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 POM121CA8CG34 1229 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 SIRPB1O00241 398 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 SH2D1BO14796 132 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 SIAH2O43255 324 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 SPRY3O43610 288 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 KNG1P01042 644 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 OR5H8P0DN80 308 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 EGR1P18146 543 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 GLRA1P23415 457 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 NPY4RP50391 375 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 GMFBP60983 142 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 SNTB1Q13884 538 aaKnown RBP7.95□□□□□ -1.14
SF3B1-211ENST00000487698 SURF2Q15527 256 aaPredicted RBP7.95□□□□□ -1.14
SF3B1-211ENST00000487698 PAN3Q58A45 887 aaKnown RBP7.95□□□□□ -1.14
SF3B1-211ENST00000487698 DHRS11Q6UWP2 260 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 C20orf204Q6ZNR8 217 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 SPICQ8N5J4 248 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 GCSAMQ8N6F7 178 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 LINC01560Q8TB33 94 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 PLPPR1Q8TBJ4 325 aa7.95□□□□□ -1.14
SF3B1-211ENST00000487698 NEK7Q8TDX7 302 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms