RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 Q8N2B8 174 aa15.39■□□□□ 0.05
CLIP2-206ENST00000487091 NDNFQ8TB73 568 aa15.39■□□□□ 0.05
CLIP2-206ENST00000487091 CFHR4Q92496 578 aa15.39■□□□□ 0.05
CLIP2-206ENST00000487091 NOTCH1P46531 2555 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 CMYA5Q8N3K9 4069 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 ODAMA1E959 279 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 SLC33A1O00400 549 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-206ENST00000487091 DEGS1O15121 323 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 MAGEB3O15480 346 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 TSPAN15O95858 294 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 RAB3AP20336 220 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 HTR1DP28221 377 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 SCN1BQ07699 218 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 IL18R1Q13478 541 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 CDK5R1Q15078 307 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 TMPRSS11AQ6ZMR5 421 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 ABHD12Q8N2K0 398 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 KLHDC1Q8N7A1 406 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 GPR148Q8TDV2 347 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 NKX3-1Q99801 234 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-206ENST00000487091 ZNF702PQ9H963 129 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 C8orf4Q9NR00 106 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 HILPDAQ9Y5L2 63 aa15.38■□□□□ 0.05
CLIP2-206ENST00000487091 CD2P06729 351 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 CSF1P09603 554 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 CDK2P24941 298 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 CD34P28906 385 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 ETV1P50549 477 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 BDH1Q02338 343 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 SLC34A1Q06495 639 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 KRBOX4Q5JUW0 171 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 TTC23Q5W5X9 447 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 OR4P4Q8NGL7 312 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 ZNF596Q8TC21 504 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 RGP1Q92546 391 aaPredicted RBP15.37■□□□□ 0.05
CLIP2-206ENST00000487091 COQ2Q96H96 371 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 DPM3Q9P2X0 92 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 FOXJ3Q9UPW0 622 aa15.37■□□□□ 0.05
CLIP2-206ENST00000487091 FAM90A22PA8MWA6 464 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 H3BUI4 141 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 F2RL2O00254 374 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 OGG1O15527 345 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 ALDOBP05062 364 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 SOX2P48431 317 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 PDLIM3Q53GG5 364 aaPredicted RBP15.36■□□□□ 0.05
CLIP2-206ENST00000487091 PRAMEF5Q5TYX0 476 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 XAF1Q6GPH4 301 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 ASCL4Q6XD76 172 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 TMEM219Q86XT9 240 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 PACRGLQ8N7B6 248 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 Q8NFD4 153 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 OR51T1Q8NGJ9 327 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 CNIH3Q8TBE1 160 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 GPER1Q99527 375 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 PRSS22Q9GZN4 317 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 NCOR1P1Q9H4R4 102 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 SERTAD4Q9NUC0 356 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 BABAM2Q9NXR7 383 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 OR6C3Q9NZP0 311 aa15.36■□□□□ 0.05
CLIP2-206ENST00000487091 DIMT1Q9UNQ2 313 aaKnown RBP15.36■□□□□ 0.05
CLIP2-206ENST00000487091 EXOSC1Q9Y3B2 195 aaKnown RBP15.36■□□□□ 0.05
CLIP2-206ENST00000487091 ZNF729A6NN14 1252 aaPredicted RBP15.35■□□□□ 0.05
CLIP2-206ENST00000487091 GABRPO00591 440 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 CLIC3O95833 236 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 IGLV1-47P01700 117 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 MYL12AP19105 171 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 PTGFRP43088 359 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 IL13RA2Q14627 380 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 OR2G6Q5TZ20 316 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 BAIAP2L2Q6UXY1 529 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 SATL1Q86VE3 508 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 SETD9Q8NE22 299 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 OR4D6Q8NGJ1 314 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 OR51A2Q8NGJ7 313 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 FAM110DQ8TAY7 271 aaPredicted RBP15.35■□□□□ 0.05
CLIP2-206ENST00000487091 TNFAIP8L1Q8WVP5 186 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 TMEM106AQ96A25 262 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 TAS2R4Q9NYW5 299 aa15.35■□□□□ 0.05
CLIP2-206ENST00000487091 A0A087X0M5 115 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 A0A1B0GX30 115 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 H0YJX3 145 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 VSIG10L2P0DP72 767 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 JUNBP17275 347 aaPredicted RBP15.34■□□□□ 0.05
CLIP2-206ENST00000487091 ATXN7L3Q14CW9 347 aaPredicted RBP15.34■□□□□ 0.05
CLIP2-206ENST00000487091 LRRC36Q1X8D7 754 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 ZNF565Q8N9K5 539 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 CREB3L1Q96BA8 519 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 NR1H4Q96RI1 486 aaPredicted RBP15.34■□□□□ 0.05
CLIP2-206ENST00000487091 TMEM138Q9NPI0 162 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 ZNF281Q9Y2X9 895 aa15.34■□□□□ 0.05
CLIP2-206ENST00000487091 SIRT4Q9Y6E7 314 aaPredicted RBP15.34■□□□□ 0.05
CLIP2-206ENST00000487091 TRAV24A0A0B4J272 114 aa15.33■□□□□ 0.04
CLIP2-206ENST00000487091 KBTBD11-OT1A0A1B0GTJ5 212 aa15.33■□□□□ 0.04
CLIP2-206ENST00000487091 LEUTXA8MZ59 168 aa15.33■□□□□ 0.04
CLIP2-206ENST00000487091 CGB3P0DN86 165 aa15.33■□□□□ 0.04
CLIP2-206ENST00000487091 CGB7P0DN87 165 aa15.33■□□□□ 0.04
CLIP2-206ENST00000487091 GDNFP39905 211 aa15.33■□□□□ 0.04
CLIP2-206ENST00000487091 KCNJ3P48549 501 aa15.33■□□□□ 0.04
CLIP2-206ENST00000487091 ARHGDIBP52566 201 aa15.33■□□□□ 0.04
CLIP2-206ENST00000487091 PRRX1P54821 245 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms