RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 ERVK13-1Q9NX77 482 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 DPM3Q9P2X0 92 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 NOTCH3Q9UM47 2321 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 ODAMA1E959 279 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 ADARB2-AS1A8MUL3 147 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 SLC33A1O00400 549 aaPredicted RBP19.67■□□□□ 0.74
LIME1-206ENST00000487026 ATXN7L3Q14CW9 347 aaPredicted RBP19.67■□□□□ 0.74
LIME1-206ENST00000487026 KISS1Q15726 138 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 FBLN7Q53RD9 439 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 KRBOX4Q5JUW0 171 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 SYS1Q8N2H4 156 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 OR5D14Q8NGL3 314 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 STMN2Q93045 179 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 R3HDM4Q96D70 268 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 COQ2Q96H96 371 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 NR1H4Q96RI1 486 aaPredicted RBP19.67■□□□□ 0.74
LIME1-206ENST00000487026 OCSTAMPQ9BR26 566 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 TAS2R3Q9NYW6 316 aa19.67■□□□□ 0.74
LIME1-206ENST00000487026 FADS2O95864 444 aaKnown RBP19.66■□□□□ 0.74
LIME1-206ENST00000487026 ZP1P60852 638 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 BDH1Q02338 343 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 CDK5R1Q15078 307 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 LPCAT4Q643R3 524 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 RTN4RL2Q86UN3 420 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 NDUFA11Q86Y39 141 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 SERPINA12Q8IW75 414 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 OR5AK2Q8NH90 309 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 PPIL3Q9H2H8 161 aaKnown RBP19.66■□□□□ 0.74
LIME1-206ENST00000487026 DHDHQ9UQ10 334 aa19.66■□□□□ 0.74
LIME1-206ENST00000487026 SULT1B1O43704 296 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 IGLV1-47P01700 117 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 OXLD1Q5BKU9 147 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 KPRPQ5T749 579 aaPredicted RBP19.65■□□□□ 0.74
LIME1-206ENST00000487026 CCDC121Q6ZUS5 278 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 OR52I1Q8NGK6 324 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 ZNF596Q8TC21 504 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 TSEN15Q8WW01 171 aaKnown RBP19.65■□□□□ 0.74
LIME1-206ENST00000487026 Q96MT0 163 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 C9orf16Q9BUW7 83 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 RHOFQ9HBH0 211 aa19.65■□□□□ 0.74
LIME1-206ENST00000487026 LOC100130705A0A1B0GUX0 176 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 TMEM212A6NML5 194 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 LEUTXA8MZ59 168 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 H3BUI4 141 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 HSPB6O14558 160 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 TOR1AO14656 332 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 BRS3P32247 399 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 PTGFRP43088 359 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 GTF2A1P52655 376 aaPredicted RBP19.64■□□□□ 0.73
LIME1-206ENST00000487026 GBX2P52951 348 aaPredicted RBP19.64■□□□□ 0.73
LIME1-206ENST00000487026 C17orf58Q2M2W7 97 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 ZNF691Q5VV52 312 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 PARP16Q8N5Y8 322 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 CHST4Q8NCG5 386 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 OR5AU1Q8NGC0 362 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 OR4D6Q8NGJ1 314 aa19.64■□□□□ 0.73
LIME1-206ENST00000487026 MYCBPQ99417 103 aaPredicted RBP19.64■□□□□ 0.73
LIME1-206ENST00000487026 A0A1W2PRX2 142 aa19.63■□□□□ 0.73
LIME1-206ENST00000487026 MPZL2O60487 215 aa19.63■□□□□ 0.73
LIME1-206ENST00000487026 ALX3O95076 343 aa19.63■□□□□ 0.73
LIME1-206ENST00000487026 CSN2P05814 226 aa19.63■□□□□ 0.73
LIME1-206ENST00000487026 RAB40BQ12829 278 aa19.63■□□□□ 0.73
LIME1-206ENST00000487026 RBM39Q14498 530 aaKnown RBP19.63■□□□□ 0.73
LIME1-206ENST00000487026 ZSCAN26Q16670 478 aa19.63■□□□□ 0.73
LIME1-206ENST00000487026 SATL1Q86VE3 508 aa19.63■□□□□ 0.73
LIME1-206ENST00000487026 FAM118AQ9NWS6 357 aa19.63■□□□□ 0.73
LIME1-206ENST00000487026 SH2D7A6NKC9 451 aaPredicted RBP19.62■□□□□ 0.73
LIME1-206ENST00000487026 H0YJX3 145 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 BUB1B-PAK6H3BSN5 160 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 NFYBP25208 207 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 CD34P28906 385 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 SOX2P48431 317 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 HLA-DRB5Q30154 266 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 OR4F17Q8NGA8 305 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 OR51A2Q8NGJ7 313 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 OR10K1Q8NGX5 313 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 APH1BQ8WW43 257 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 OR4F4Q96R69 305 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 SLC25A33Q9BSK2 321 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 S100A14Q9HCY8 104 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 INPP5EQ9NRR6 644 aa19.62■□□□□ 0.73
LIME1-206ENST00000487026 ZNF729A6NN14 1252 aaPredicted RBP19.61■□□□□ 0.73
LIME1-206ENST00000487026 LY6LH3BQJ8 138 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 IGHV3-7P01780 117 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 ALDOBP05062 364 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 CCDC159P0C7I6 412 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 OR3A4PP47883 348 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 MTNR1BP49286 362 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 PRRX1P54821 245 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 SMN1Q16637 294 aaKnown RBP19.61■□□□□ 0.73
LIME1-206ENST00000487026 ABCA11PQ4W5N1 156 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 TPTE2P1Q5T6R2 138 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 TNFAIP8L1Q8WVP5 186 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 CAPSLQ8WWF8 208 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 RGP1Q92546 391 aaPredicted RBP19.61■□□□□ 0.73
LIME1-206ENST00000487026 GPER1Q99527 375 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 LIN7BQ9HAP6 207 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 KIF25Q9UIL4 384 aa19.61■□□□□ 0.73
LIME1-206ENST00000487026 RPL36Q9Y3U8 105 aaKnown RBP19.61■□□□□ 0.73
LIME1-206ENST00000487026 TRAV24A0A0B4J272 114 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms