RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 EDN3P14138 238 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 FAHP16930 419 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 CCKARP32238 428 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 TSPAN7P41732 249 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 FGF8P55075 233 aaPredicted RBP9.23□□□□□ -0.93
CCDC171-208ENST00000486641 HNRNPKP61978 463 aaKnown RBP eCLIP9.23□□□□□ -0.93
CCDC171-208ENST00000486641 PLCXD2Q0VAA5 305 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 ADIRFQ15847 76 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 LCN15Q6UWW0 184 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF573Q86YE8 665 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 C20orf196Q8IYI0 205 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 OR51G1Q8NGK1 321 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 PCGF1Q9BSM1 259 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 MRPL13Q9BYD1 178 aaKnown RBP9.23□□□□□ -0.93
CCDC171-208ENST00000486641 CHST11Q9NPF2 352 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 FKBP11Q9NYL4 201 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 KLHL13Q9P2N7 655 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 DOCK8Q8NF50 2099 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 LTBP2Q14767 1821 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 RANBP2P49792 3224 aaKnown RBP9.23□□□□□ -0.93
CCDC171-208ENST00000486641 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 KIR2DL5BA0A0G2JN68 375 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 KIR2DL5BA0A0G2JPC4 375 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 PPP5D1E7EU14 171 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 TNFSF12O43508 249 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 GNRH1P01148 92 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 CELA2BP08218 269 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF133P52736 654 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-208ENST00000486641 RUNX3Q13761 415 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 ARSJQ5FYB0 599 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-208ENST00000486641 THEM4Q5T1C6 240 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 RTL10Q7L3V2 364 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 TGIF2LYQ8IUE0 185 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 KIR2DL5AQ8N109 375 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 IL22RA1Q8N6P7 574 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 RPRMQ9NS64 109 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 FUT9Q9Y231 359 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 NPIPB13A6NJU9 1138 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 NPIPB4C9JG80 1138 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 M0QZK8 103 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 TP53I11O14683 189 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 MPPED1O15442 326 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 GGCTO75223 188 aaKnown RBP9.22□□□□□ -0.93
CCDC171-208ENST00000486641 HLA-HP01893 362 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 CTSEP14091 401 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 IRF2P14316 349 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 GALR1P47211 349 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 IDH3GP51553 393 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF726P1Q15940 193 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 RSPO4Q2I0M5 234 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-208ENST00000486641 SSX7Q7RTT5 188 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 FGF14Q92915 247 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 MOB3AQ96BX8 217 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 PGAM5Q96HS1 289 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 DIRC2Q96SL1 478 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 ATP5SQ99766 215 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 ELOVL1Q9BW60 279 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 LANCL2Q9NS86 450 aa9.22□□□□□ -0.93
CCDC171-208ENST00000486641 CDH23Q9H251 3354 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 CEBPZOSA8MTT3 80 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 ADAM20O43506 726 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 ANGPTL7O43827 346 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 CHST1O43916 411 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 AADACP22760 399 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 CTHP32929 405 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 WNT5AP41221 380 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 CLRN1P58418 232 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 SMAD4Q13485 552 aaKnown RBP9.21□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF542PQ5EBM4 170 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 ACTL10Q5JWF8 245 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 CARD17Q5XLA6 110 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 HLA-DQA1Q5Y7H0 255 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 CARFQ8N187 725 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 GBGT1Q8N5D6 347 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 CCDC71LQ8N9Z2 235 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 FAM131CQ96AQ9 280 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 TMEM222Q9H0R3 208 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 SERINC1Q9NRX5 453 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 B3GAT1Q9P2W7 334 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 PRSS50Q9UI38 385 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 NAGKQ9UJ70 344 aa9.21□□□□□ -0.93
CCDC171-208ENST00000486641 SHISA8B8ZZ34 492 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 H3BML4 177 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 DTYMKP23919 212 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 UCP3P55916 312 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 BAXQ07812 192 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 LRP11Q86VZ4 500 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF695Q8IW36 515 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 SELENOHQ8IZQ5 122 aaKnown RBP9.21□□□□□ -0.94
CCDC171-208ENST00000486641 CAPNS2Q96L46 248 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 SIGLEC12Q96PQ1 595 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 P2RX4Q99571 388 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 RSG1Q9BU20 258 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 NAT8Q9UHE5 227 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 PIGLQ9Y2B2 252 aa9.21□□□□□ -0.94
CCDC171-208ENST00000486641 SHANK1Q9Y566 2161 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms