RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 FXYD4P59646 89 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 UBA52P62987 128 aaKnown RBP17.35■□□□□ 0.37
HPS3-206ENST00000486530 ATXN7L3Q14CW9 347 aaPredicted RBP17.35■□□□□ 0.37
HPS3-206ENST00000486530 Q8IYB0 196 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 SLC38A6Q8IZM9 456 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 ZNF610Q8N9Z0 462 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 INO80EQ8NBZ0 244 aaPredicted RBP17.35■□□□□ 0.37
HPS3-206ENST00000486530 C2orf50Q96LR7 162 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 VRK1Q99986 396 aaPredicted RBP17.35■□□□□ 0.37
HPS3-206ENST00000486530 OPN3Q9H1Y3 402 aaPredicted RBP17.35■□□□□ 0.37
HPS3-206ENST00000486530 ZNF71Q9NQZ8 489 aaPredicted RBP17.35■□□□□ 0.37
HPS3-206ENST00000486530 TUBG2Q9NRH3 451 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 KIF25Q9UIL4 384 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 TRBV6-7A0A0A0MS04 114 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 MKRN2OSH3BPM6 223 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 BCL2L11O43521 198 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 AGFG2O95081 481 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 HERV-K104P61576 105 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 PSG7Q13046 419 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 BEND4Q6ZU67 534 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 SUMF2Q8NBJ7 301 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 C1QTNF6Q9BXI9 259 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 KCNIP3Q9Y2W7 256 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 APC2O95996 2303 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 KIR2DS1A0A191URI9 304 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 K7ENP7 123 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 RHBDL1O75783 438 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 ZNF205O95201 554 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 IGLV1-44P01699 117 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 DUSP1P28562 367 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 KIR2DS4P43632 304 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 RBM39Q14498 530 aaKnown RBP17.34■□□□□ 0.37
HPS3-206ENST00000486530 KIR2DS1Q14954 304 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 ESCO2Q56NI9 601 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 BHLHA15Q7RTS1 189 aaPredicted RBP17.34■□□□□ 0.37
HPS3-206ENST00000486530 WDR86Q86TI4 376 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 KLF14Q8TD94 323 aaPredicted RBP17.34■□□□□ 0.37
HPS3-206ENST00000486530 FAM122AQ96E09 287 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 ABHD17AQ96GS6 310 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 NAA60Q9H7X0 242 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 MEMO1Q9Y316 297 aa17.34■□□□□ 0.37
HPS3-206ENST00000486530 PRRC2CQ9Y520 2896 aaKnown RBP17.34■□□□□ 0.37
HPS3-206ENST00000486530 TMEM210A6NLX4 147 aa17.33■□□□□ 0.37
HPS3-206ENST00000486530 CECR9P0C854 216 aa17.33■□□□□ 0.37
HPS3-206ENST00000486530 POC1AQ8NBT0 407 aa17.33■□□□□ 0.37
HPS3-206ENST00000486530 SCCPDHQ8NBX0 429 aa17.33■□□□□ 0.37
HPS3-206ENST00000486530 RTN4IP1Q8WWV3 396 aaPredicted RBP17.33■□□□□ 0.37
HPS3-206ENST00000486530 GALNT14Q96FL9 552 aa17.33■□□□□ 0.37
HPS3-206ENST00000486530 OR10C1Q96KK4 312 aa17.33■□□□□ 0.37
HPS3-206ENST00000486530 AMDHD2Q9Y303 409 aa17.33■□□□□ 0.37
HPS3-206ENST00000486530 TRBV6-6A0A0A6YYG2 114 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 HSPB6O14558 160 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 PPYP01298 95 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 HOXB5P09067 269 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 PET100P0DJ07 73 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 AADACP22760 399 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 TBR1Q16650 682 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 IGSF11Q5DX21 431 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 C1orf185Q5T7R7 199 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 ALKAL2Q6UX46 152 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 DCUN1D4Q92564 292 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 SYT3Q9BQG1 590 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 RSRP1Q9BUV0 290 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 SLC2A9Q9NRM0 540 aa17.33■□□□□ 0.36
HPS3-206ENST00000486530 TRAV24A0A0B4J272 114 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 OR5H1A6NKK0 313 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 MPTX1A8MV57 137 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 MPV17P39210 176 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 OR8G1Q15617 311 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 ALKBH6Q3KRA9 238 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 FAM169BQ8N8A8 192 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 CCDC71LQ8N9Z2 235 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 OR5T2Q8NGG2 359 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 SUCNR1Q9BXA5 334 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 BCL2L14Q9BZR8 327 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 FAM215AQ9Y5M1 114 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 ATP23Q9Y6H3 246 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 SVILO95425 2214 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 SHANK1Q9Y566 2161 aa17.32■□□□□ 0.36
HPS3-206ENST00000486530 TRDCB7Z8K6 153 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 SPDEFO95238 335 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 DIRAS3O95661 229 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 TK1P04183 234 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 CTXN2P0C2S0 81 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 LYL1P12980 280 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 ERVK11-1P61568 191 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 ZNF154Q13106 437 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 PRSS54Q6PEW0 395 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 C1orf174Q8IYL3 243 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 MRPL30Q8TCC3 161 aaKnown RBP17.31■□□□□ 0.36
HPS3-206ENST00000486530 PCNPQ8WW12 178 aaKnown RBP17.31■□□□□ 0.36
HPS3-206ENST00000486530 ST8SIA2Q92186 375 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 RNF126Q9BV68 326 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 PURGQ9UJV8 347 aaKnown RBP17.31■□□□□ 0.36
HPS3-206ENST00000486530 MGAQ8IWI9 3026 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.31■□□□□ 0.36
HPS3-206ENST00000486530 IFNA21P01568 189 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 IL15RAQ13261 267 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 IGFBP7Q16270 282 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 KRTCAP3Q53RY4 240 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms