RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
POLR2J3-204ENST00000486319 TERB2Q8NHR7 220 aa12.37□□□□□ -0.43
POLR2J3-204ENST00000486319 NRGNQ92686 78 aa12.37□□□□□ -0.43
POLR2J3-204ENST00000486319 CYYR1Q96J86 154 aa12.37□□□□□ -0.43
POLR2J3-204ENST00000486319 C12orf4Q9NQ89 552 aa12.37□□□□□ -0.43
POLR2J3-204ENST00000486319 ZNF581Q9P0T4 197 aa12.37□□□□□ -0.43
POLR2J3-204ENST00000486319 FZR1Q9UM11 496 aa12.37□□□□□ -0.43
POLR2J3-204ENST00000486319 GLAP06280 429 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 GRPP07492 148 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 FCGR3AP08637 254 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 PGA5P0DJD9 388 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 SULT1A3P0DMM9 295 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 SULT1A4P0DMN0 295 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 VSIG10L2P0DP72 767 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 KLF3P57682 345 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 ARPC4P59998 168 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 ERVK11-1P61568 191 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 IKZF1Q13422 519 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 PDCD1Q15116 288 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 CDK10Q15131 360 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 GRK1Q15835 563 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 ATPAF1Q5TC12 328 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 ZNF488Q96MN9 340 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 SCGB3A2Q96PL1 93 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 FYTTD1Q96QD9 318 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 SEC22CQ9BRL7 303 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 HDHD3Q9BSH5 251 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 PPA2Q9H2U2 334 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 IFT22Q9H7X7 185 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 ZNF69Q9UC07 566 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 ANXA10Q9UJ72 324 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 ITGB1BP2Q9UKP3 347 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 SPG11Q96JI7 2443 aa12.36□□□□□ -0.43
POLR2J3-204ENST00000486319 PDZD2O15018 2839 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 MCRIP1C9JLW8 97 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 ATP6V1G2-DDX39BF2Z307 99 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 CDIPTO14735 213 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 NOS1APO75052 506 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 SELENOVP59797 346 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 SRSF7Q16629 238 aaKnown RBP eCLIP12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 Q6ZR03 302 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 OVCH2Q7RTZ1 564 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 NUP37Q8NFH4 326 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 MAFIPQ8WZ33 124 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 PIK3IP1Q96FE7 263 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 HS3ST6Q96QI5 342 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 NRIP2Q9BQI9 281 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 TLNRD1Q9H1K6 362 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 LIME1Q9H400 295 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 ZNF286AQ9HBT8 521 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 EHFQ9NZC4 300 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 DUSP13Q9UII6 198 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 ZNF222Q9UK12 451 aa12.35□□□□□ -0.43
POLR2J3-204ENST00000486319 IGLV3-9A0A075B6K5 115 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 CEACAM18A8MTB9 384 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 DEFB108AA8MXU0 73 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 F5H5P2 479 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 THBDP07204 575 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 OR4E1P0C645 316 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 ANXA3P12429 323 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 RBM39Q14498 530 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 C4orf46Q504U0 113 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 FAHD2BQ6P2I3 314 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 FIP1L1Q6UN15 594 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 TMED4Q7Z7H5 227 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 WFDC8Q8IUA0 241 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 POC1AQ8NBT0 407 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 OR11H7Q8NGC8 314 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 TMEM171Q8WVE6 324 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 GTF3AQ92664 365 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 FAHD2AQ96GK7 314 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 DMRTB1Q96MA1 342 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 TRAF4Q9BUZ4 470 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 RIMS4Q9H426 269 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 MSL2Q9HCI7 577 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 NGBQ9NPG2 151 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 IL36RNQ9UBH0 155 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 VSIG4Q9Y279 399 aa12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-204ENST00000486319 ABCA4P78363 2273 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 MEIKINA0A087WXM9 373 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 PLSCR5A0PG75 271 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 OR2AT4A6NND4 320 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 SIAH2O43255 324 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 CD200P41217 278 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 ECI1P42126 302 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 TAS2R31P59538 309 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 SPIN3Q5JUX0 258 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 LHFPL1Q86WI0 220 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 SPICQ8N5J4 248 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 ZNF431Q8TF32 576 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 DYRK2Q92630 601 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 PLEKHF2Q9H8W4 249 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 CHMP1AQ9HD42 196 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 NECAP2Q9NVZ3 263 aa12.33□□□□□ -0.44
POLR2J3-204ENST00000486319 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
POLR2J3-204ENST00000486319 SDCBPO00560 298 aaPredicted RBP12.32□□□□□ -0.44
POLR2J3-204ENST00000486319 DEGS1O15121 323 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms