RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 ZNF391Q9UJN7 358 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 TMEM202A6NGA9 273 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 FCMRO60667 390 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 PAGE4O60829 102 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 CXorf1O96002 111 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 POLR2GP62487 172 aaKnown RBP eCLIP7.79□□□□□ -1.16
GABRE-209ENST00000486255 CD300CQ08708 224 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 SMAD4Q13485 552 aaKnown RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 LGALSLQ3ZCW2 172 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 FAHD2BQ6P2I3 314 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 RTN4RL1Q86UN2 441 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 ZNF502Q8TBZ5 544 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 KTI12Q96EK9 354 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 MS4A3Q96HJ5 214 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 DDA1Q9BW61 102 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 HES7Q9BYE0 225 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 MARCH5Q9NX47 278 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 SPRY3O43610 288 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 DDTP30046 118 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 FGF9P31371 208 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 BSGP35613 385 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 TWIST1Q15672 202 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 ANKRD33Q7Z3H0 272 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 REC114Q7Z4M0 266 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 CAMKMTQ7Z624 323 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 CXorf67Q86X51 503 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 FBXL14Q8N1E6 418 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 GBGT1Q8N5D6 347 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 MYOZ1Q9NP98 299 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 NEU3Q9UQ49 428 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 KISS1Q15726 138 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 Q5PR19 223 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 SLC35E3Q7Z769 313 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 LYG1Q8N1E2 194 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 OR1P1Q8NH06 330 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 APOBEC3DQ96AK3 386 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 ADTRPQ96IZ2 230 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 WFIKKN1Q96NZ8 548 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 TMEM208Q9BTX3 173 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 TARM1B6A8C7 271 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 J3KRW8 73 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 LYZL6O75951 148 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 PPICP45877 212 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 HSF5Q4G112 596 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 METRNLQ641Q3 311 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 JMJD6Q6NYC1 403 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 ERASQ7Z444 233 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 MRGPRGQ86SM5 289 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 NUP37Q8NFH4 326 aa7.79□□□□□ -1.16
GABRE-209ENST00000486255 AMMECR1Q9Y4X0 333 aaPredicted RBP7.79□□□□□ -1.16
GABRE-209ENST00000486255 FAM157CP0CG43 387 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 HIST1H1BP16401 226 aaKnown RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 ZNF683Q8IZ20 524 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 MIEN1Q9BRT3 115 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 CXCL16Q9H2A7 254 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 DICER1Q9UPY3 1922 aaKnown RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 CTSDP07339 412 aaPredicted RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 NPBWR2P48146 333 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 MRPL58Q14197 206 aaKnown RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 JOSD1Q15040 202 aaPredicted RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 ZNF766Q5HY98 468 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 SFTPA2Q8IWL1 248 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 SFTPA1Q8IWL2 248 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 LRRC75AQ8NAA5 344 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 DOK1Q99704 481 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 TMEM38BQ9NVV0 291 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 IGHV3-43A0A0B4J1X8 118 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 GFYI3L273 518 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 IGHV3-43DP0DP04 118 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 MVDP53602 400 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 TFF2Q03403 129 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 PMCHL1Q16048 86 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 C10orf113Q5VZT2 155 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 OR2Z1Q8NG97 314 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 FGF13Q92913 245 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 PHF7Q9BWX1 381 aaPredicted RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 NTMQ9P121 344 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 TRBV23-1A0A0A0MS06 115 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 SLC25A1P53007 311 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 CYB5R2Q6BCY4 276 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 RPS19BP1Q86WX3 136 aaKnown RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 HS3ST3A1Q9Y663 406 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 CXCL13O43927 109 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 KIR2DL1P43626 348 aaPredicted RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 KIR2DL2P43627 348 aaPredicted RBP7.78□□□□□ -1.16
GABRE-209ENST00000486255 LIMS2Q7Z4I7 341 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 UBALD2Q8IYN6 164 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 GVQW1Q8N7I0 195 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 OIT3Q8WWZ8 545 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 PMCHL2Q9BQD1 86 aa7.78□□□□□ -1.16
GABRE-209ENST00000486255 UPK1AO00322 258 aa7.77□□□□□ -1.16
GABRE-209ENST00000486255 BTF3P20290 206 aaKnown RBP7.77□□□□□ -1.16
GABRE-209ENST00000486255 CA6P23280 308 aa7.77□□□□□ -1.16
GABRE-209ENST00000486255 HOXA6P31267 233 aa7.77□□□□□ -1.16
GABRE-209ENST00000486255 EWSR1Q01844 656 aaKnown RBP eCLIP7.77□□□□□ -1.16
GABRE-209ENST00000486255 FAM78AQ5JUQ0 283 aa7.77□□□□□ -1.16
GABRE-209ENST00000486255 PARM1Q6UWI2 310 aa7.77□□□□□ -1.16
GABRE-209ENST00000486255 ZNF600Q6ZNG1 722 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms