RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 KCNRGQ8N5I3 272 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 CCDC71LQ8N9Z2 235 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 WDR89Q96FK6 387 aaPredicted RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 SYT3Q9BQG1 590 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 RSRP1Q9BUV0 290 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 MFFQ9GZY8 342 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 OPN3Q9H1Y3 402 aaPredicted RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 WDR13Q9H1Z4 485 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SEBOXQ9HB31 216 aaPredicted RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 MEMO1Q9Y316 297 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 IGHV1-18A0A0C4DH31 117 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 TRDCB7Z8K6 153 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 TUSC2O75896 110 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SLC34A2O95436 690 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 PTBP3O95758 552 aaKnown RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 TK1P04183 234 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 WNT2P09544 360 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 GLRA1P23415 457 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 IL32P24001 234 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 PSMB6P28072 239 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SSTR2P30874 369 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SERPINF1P36955 418 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 UCNP55089 124 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 HERV-K104P61576 105 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SRPXP78539 464 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 ZNF154Q13106 437 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 BAMBIQ13145 260 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 IL15RAQ13261 267 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 EXOSC2Q13868 293 aaKnown RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 ANKRD55Q3KP44 614 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 ESCO2Q56NI9 601 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SPATA46Q5T0L3 261 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 Q6P435 159 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 ACOT7LQ6ZUV0 252 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 ZNF546Q86UE3 836 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 POC1AQ8NBT0 407 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SCCPDHQ8NBX0 429 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 THAP6Q8TBB0 222 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 CABLES2Q9BTV7 478 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 DPCDQ9BVM2 203 aaPredicted RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 SCNM1Q9BWG6 230 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 ARL6Q9H0F7 186 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 CXXC4Q9H2H0 198 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 LIME1Q9H400 295 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 NAA60Q9H7X0 242 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 CHMP1AQ9HD42 196 aaPredicted RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 TMEM100Q9NV29 134 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 PCDHB10Q9UN67 800 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 KCNIP3Q9Y2W7 256 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 TRAV24A0A0B4J272 114 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 RPS10-NUDT3A0A1W2PQS6 291 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 DEGS1O15121 323 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 TSC22D2O75157 780 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 PPYP01298 95 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 FCGR2CP31995 323 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 KCNJ3P48549 501 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 AP2S1P53680 142 aaPredicted RBP10.17□□□□□ -0.78
PKP4-213ENST00000486254 NAAAQ02083 359 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 PAX5Q02548 391 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 NHLH1Q02575 133 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 FOXC1Q12948 553 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 OR8G1Q15617 311 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 ZNF474Q6S9Z5 364 aaPredicted RBP10.17□□□□□ -0.78
PKP4-213ENST00000486254 KCTD9Q7L273 389 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 SUMF2Q8NBJ7 301 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 NAXEQ8NCW5 288 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 OR4A4PQ8NGN8 299 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 MRPL30Q8TCC3 161 aaKnown RBP10.17□□□□□ -0.78
PKP4-213ENST00000486254 ABHD17AQ96GS6 310 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 C2orf50Q96LR7 162 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 GSX2Q9BZM3 304 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 SLC2A9Q9NRM0 540 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 TUBD1Q9UJT1 453 aa10.17□□□□□ -0.78
PKP4-213ENST00000486254 A0A1W2PR80 420 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 C5orf51A6NDU8 294 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 K7EM74 188 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 LMO1P25800 156 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 GCH1P30793 250 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 MPV17P39210 176 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 PIGPP57054 158 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 UBA52P62987 128 aaKnown RBP10.16□□□□□ -0.78
PKP4-213ENST00000486254 SLC9A3R2Q15599 337 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 ABCA11PQ4W5N1 156 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 MRGPRGQ86SM5 289 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 LDLRAD3Q86YD5 345 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 PRR7Q8TB68 274 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 RTN4IP1Q8WWV3 396 aaPredicted RBP10.16□□□□□ -0.78
PKP4-213ENST00000486254 DYRK2Q92630 601 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 PHYHIPLQ96FC7 376 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 HS3ST6Q96QI5 342 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 OR51B6Q9H340 312 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 MED9Q9NWA0 146 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 KIF25Q9UIL4 384 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 TP53TG5Q9Y2B4 290 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 ZNF835Q9Y2P0 537 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 SPEF1Q9Y4P9 236 aa10.16□□□□□ -0.78
PKP4-213ENST00000486254 TEX13DA0A0J9YY54 714 aaPredicted RBP10.15□□□□□ -0.78
PKP4-213ENST00000486254 RNF222A6NCQ9 220 aa10.15□□□□□ -0.78
PKP4-213ENST00000486254 ERVH48-1M5A8F1 160 aa10.15□□□□□ -0.78
PKP4-213ENST00000486254 CCSO14618 274 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms