RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 RANBP3Q9H6Z4 567 aaPredicted RBP14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 TAS2R3Q9NYW6 316 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 SIRT4Q9Y6E7 314 aaPredicted RBP14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 MINOS1-NBL1R4GNA1 71 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 SLC33A1O00400 549 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 ALDOBP05062 364 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 MED21Q13503 144 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 PLA1AQ53H76 456 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 OR52W1Q6IF63 320 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 OR4C13Q8NGP0 309 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 GPER1Q99527 375 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 CLEC7AQ9BXN2 247 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 NPFFR1Q9GZQ6 430 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 GAL3ST2Q9H3Q3 398 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 ABCB10Q9NRK6 738 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 CHCHD3Q9NX63 227 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 TAS2R4Q9NYW5 299 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 CLEC2DQ9UHP7 191 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 ZNF281Q9Y2X9 895 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 SIGLEC9Q9Y336 463 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 HSPE1-MOB4S4R3N1 261 aa14.87□□□□□ -0.03
PRPF40A-209ENST00000486100 MEGF11A6BM72 1044 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 GABRPO00591 440 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 CHST1O43916 411 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 DYNLT3P51808 116 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 EFNB2P52799 333 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 KRBOX4Q5JUW0 171 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 C11orf88Q6PI97 169 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 HEPN1Q6WQI6 88 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 ASCL4Q6XD76 172 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 Q8NFD4 153 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 OR52N1Q8NH53 320 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 TNFAIP8L1Q8WVP5 186 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 GGHQ92820 318 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 TMEM106AQ96A25 262 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 SMIM19Q96E16 107 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 TCF19Q9Y242 345 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 HILPDAQ9Y5L2 63 aa14.86□□□□□ -0.03
PRPF40A-209ENST00000486100 ODAMA1E959 279 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 A6NDX4 124 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 LALBAP00709 142 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 CDK2P24941 298 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 CCBE1Q6UXH8 406 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 RTN4RL2Q86UN3 420 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 ABHD12Q8N2K0 398 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 OR51T1Q8NGJ9 327 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 OR2T6Q8NHC8 308 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 NDNFQ8TB73 568 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 GHSRQ92847 366 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 COQ2Q96H96 371 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 NR1H4Q96RI1 486 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 MMP27Q9H306 513 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 TMEM138Q9NPI0 162 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 PITPNC1Q9UKF7 332 aa14.85□□□□□ -0.03
PRPF40A-209ENST00000486100 H0YJX3 145 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 CASQ2O14958 399 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 HTR1DP28221 377 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 CAPGP40121 348 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 PTGFRP43088 359 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 ST3GAL4Q11206 333 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 IL13RA2Q14627 380 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 RSU1Q15404 277 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 OGFRL1Q5TC84 451 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 PRAMEF5Q5TYX0 476 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 DMKNQ6E0U4 476 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 C8orf59Q8N0T1 100 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 ZNF485Q8NCK3 441 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 OR4P4Q8NGL7 312 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 NKX3-1Q99801 234 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 ING3Q9NXR8 418 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 OR6C3Q9NZP0 311 aa14.84□□□□□ -0.03
PRPF40A-209ENST00000486100 TRAV24A0A0B4J272 114 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 TRBV5-5A0A0J9YX44 114 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 EFCAB10A6NFE3 127 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 ERICH4A6NGS2 130 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 PPP3R1P63098 170 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 BDH1Q02338 343 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 SLC34A1Q06495 639 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 ATXN7L3Q14CW9 347 aaPredicted RBP14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 HERPUD1Q15011 391 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 BAIAP2L2Q6UXY1 529 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 OR4D6Q8NGJ1 314 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 OR10K1Q8NGX5 313 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 ZNF596Q8TC21 504 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 BARHL1Q9BZE3 327 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 FAM192AQ9GZU8 254 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 NCOR1P1Q9H4R4 102 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 CNOT2Q9NZN8 540 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 DPM3Q9P2X0 92 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 ING4Q9UNL4 249 aa14.83□□□□□ -0.04
PRPF40A-209ENST00000486100 ZNF729A6NN14 1252 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 FAM90A22PA8MWA6 464 aa14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 GPX5O75715 221 aa14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 HTR3BO95264 441 aa14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 GNAO1P09471 354 aa14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 CGB3P0DN86 165 aa14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 CGB7P0DN87 165 aa14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 CD34P28906 385 aa14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 BDKRB2P30411 391 aa14.82□□□□□ -0.04
PRPF40A-209ENST00000486100 ZNF93P35789 620 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms