RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 FAM90A22PA8MWA6 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A12PA8MX19 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A5PA8MXJ8 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A23PA8MXZ1 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 F5H0A9 414 aaPredicted RBP14.19□□□□□ -0.14
VIM-205ENST00000485947 CTDSPLO15194 276 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 SFTPBP07988 381 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A15PP0C7V4 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A13PP0C7W8 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A14PP0C7W9 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A24PP0C7X0 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 PGA5P0DJD9 388 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 IRF2P14316 349 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 BCL3P20749 454 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 CFHR2P36980 270 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 TAS2R20P59543 309 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 ARL6IP1Q15041 203 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 PRAMEF6Q5VXH4 476 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM89BQ8N5H3 189 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 POC1AQ8NBT0 407 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 OR51T1Q8NGJ9 327 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 OR11L1Q8NGX0 322 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 JMJD8Q96S16 334 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 SELENOIQ9C0D9 397 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 C7orf69Q9H7B7 122 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FN3KRPQ9HA64 309 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 DYSFO75923 2080 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 H3BUI4 141 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 J3QRK9 145 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 RAB27BO00194 218 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 CDIPTO14735 213 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 ERVK11-1P61568 191 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 DCTN2Q13561 401 aaKnown RBP14.18□□□□□ -0.14
VIM-205ENST00000485947 KCNJ8Q15842 424 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 ESCO2Q56NI9 601 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 PYDC2Q56P42 97 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 LINC00596Q86U02 117 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 C11orf53Q8IXP5 236 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 OR10R2Q8NGX6 335 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 TMEM165Q9HC07 324 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 DCAF16Q9NXF7 216 aa14.18□□□□□ -0.14
VIM-205ENST00000485947 RHBDL1O75783 438 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 WNT2P09544 360 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 PPIAL4GP0DN37 164 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 NPBWR2P48146 333 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 VEGFCP49767 419 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 RBM11P57052 281 aaKnown RBP14.17□□□□□ -0.14
VIM-205ENST00000485947 IL13RA2Q14627 380 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 MPV17LQ2QL34 196 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 WDR82Q6UXN9 313 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 NLRC3Q7RTR2 1065 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 FAM58AQ8N1B3 248 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 NRIP2Q9BQI9 281 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 NICN1Q9BSH3 213 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 C19orf24Q9BVV8 132 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 OCEL1Q9H607 264 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 ST3GAL6Q9Y274 331 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 PPIAL4AQ9Y536 164 aa14.17□□□□□ -0.14
VIM-205ENST00000485947 TRAV18A0A075B6X5 111 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 A0A0A6YYD4 124 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 CEACAM18A8MTB9 384 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 FOXI3A8MTJ6 420 aaPredicted RBP14.16□□□□□ -0.14
VIM-205ENST00000485947 GSTZ1O43708 216 aaPredicted RBP14.16□□□□□ -0.14
VIM-205ENST00000485947 HLA-DQB1P01920 261 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 EPHA1P21709 976 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 FPR2P25090 351 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 LCN2P80188 198 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 MPPED2Q15777 294 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 FIP1L1Q6UN15 594 aaKnown RBP14.16□□□□□ -0.14
VIM-205ENST00000485947 C1orf229Q6ZS94 237 aaPredicted RBP14.16□□□□□ -0.14
VIM-205ENST00000485947 MOGAT3Q86VF5 341 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 IZUMO1Q8IYV9 350 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 EMG1Q92979 244 aaKnown RBP14.16□□□□□ -0.14
VIM-205ENST00000485947 ABHD1Q96SE0 405 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 SDHCQ99643 169 aaPredicted RBP14.16□□□□□ -0.14
VIM-205ENST00000485947 SUCNR1Q9BXA5 334 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 HES4Q9HCC6 221 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.16□□□□□ -0.14
VIM-205ENST00000485947 UFSP2Q9NUQ7 469 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 RBFOX1Q9NWB1 397 aaKnown RBP14.16□□□□□ -0.14
VIM-205ENST00000485947 C1orf123Q9NWV4 160 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 RASL12Q9NYN1 266 aa14.16□□□□□ -0.14
VIM-205ENST00000485947 MRPS7Q9Y2R9 242 aaKnown RBP14.16□□□□□ -0.14
VIM-205ENST00000485947 LOC105371242A0A075B767 164 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 GABARAPH6UMI1 98 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 SULT1C2O00338 296 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 NDUFA2O43678 99 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 UPK1BO75841 260 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 NXPH2O95156 264 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 AVPP01185 164 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 FSHBP01225 129 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 GSTP1P09211 210 aaKnown RBP14.15□□□□□ -0.14
VIM-205ENST00000485947 HIST1H1DP16402 221 aaKnown RBP14.15□□□□□ -0.14
VIM-205ENST00000485947 PRKACAP17612 351 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 ZFP36P26651 326 aaKnown RBP14.15□□□□□ -0.14
VIM-205ENST00000485947 C11orf91Q3C1V1 193 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 MOGAT2Q3SYC2 334 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 ZNF260Q3ZCT1 412 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 HACD4Q5VWC8 232 aa14.15□□□□□ -0.14
VIM-205ENST00000485947 C16orf87Q6PH81 154 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms