RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 TMEM222Q9H0R3 208 aa17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 FGF21Q9NSA1 209 aa17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 NXPH3O95157 252 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 CD63P08962 238 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 GUCA1AP43080 201 aaPredicted RBP17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 HLA-DRB3P79483 266 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 OR13D1Q8NGV5 346 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 PLEK2Q9NYT0 353 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 PRUNE2Q8WUY3 3088 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 IGLV3-32A0A0A0MS00 114 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 IGHV3-15A0A0B4J1V0 119 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 ST8SIA5O15466 376 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 HSPA12AO43301 675 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 TLX3O43711 291 aaPredicted RBP17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 OR2J2O76002 312 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 GNRHRP30968 328 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 PKIAP61925 76 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 ZNF100Q8IYN0 542 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 C10orf35Q96D05 121 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 RBM24Q9BX46 236 aaKnown RBP17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 ZNF286AQ9HBT8 521 aa17.07■□□□□ 0.32
RPUSD3-216ENST00000484134 A0A087X0M5 115 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 A0A1B0GX30 115 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 ADAM20O43506 726 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 PPYP01298 95 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 HERV-K104P61576 105 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 Q3ZCU0 254 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 CCDC71LQ8N9Z2 235 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 TPSD1Q9BZJ3 242 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 LOC102725191A0A1B0GVB3 256 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 JMJD7P0C870 316 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 PGA5P0DJD9 388 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 MDKP21741 143 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 ZNF154Q13106 437 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 COL19A1Q14993 1142 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 C10orf128Q5T292 105 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 FAM90A2PQ658T7 463 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 ASCL4Q6XD76 172 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 SELENOHQ8IZQ5 122 aaKnown RBP17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 SPSB1Q96BD6 273 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 HIST1H2BLQ99880 126 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 SLC25A31Q9H0C2 315 aa17.06■□□□□ 0.32
RPUSD3-216ENST00000484134 A0A1W2PR77 199 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 DAZAP2Q15038 168 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 CMTM1Q8IZ96 169 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 TMEM123Q8N131 208 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 M1APQ8TC57 530 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 SSX3Q99909 188 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 TGIF2Q9GZN2 237 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 ST3GAL6Q9Y274 331 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 ABCA7Q8IZY2 2146 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 LMO7DNF2Z398 122 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 SLC31A2O15432 143 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 FUT3P21217 361 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 CD38P28907 300 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 IL2RGP31785 369 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 CD200P41217 278 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 ZFP36L1Q07352 338 aaKnown RBP17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 SHBQ15464 509 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 DNLZQ5SXM8 178 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 AKR1C8PQ5T2L2 129 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 TBC1D26Q86UD7 250 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 BATF2Q8N1L9 274 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 PLPPR1Q8TBJ4 325 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 TMEM54Q969K7 222 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 PACRGQ96M98 296 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 TMEM56Q96MV1 263 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 SIGLEC12Q96PQ1 595 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 UBE2J1Q9Y385 318 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 TMEM56-RWDD3S4R434 201 aa17.05■□□□□ 0.32
RPUSD3-216ENST00000484134 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 LOC102723971A0A1B0GUV8 181 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 FOXL2NBQ6ZUU3 175 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 DPPA2Q7Z7J5 298 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 OSR2Q8N2R0 312 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 C17orf78Q8N4C9 275 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 GNPNAT1Q96EK6 184 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 P4HTMQ9NXG6 502 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 RAB11AP62491 216 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 VAMP2P63027 116 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 H3F3AP84243 136 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 ZNF695Q8IW36 515 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 LILRB2Q8N423 598 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 NAT6Q93015 286 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 CPNE4Q96A23 557 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 RBMXL1Q96E39 390 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 SNX22Q96L94 193 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 UCN2Q96RP3 112 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 SLC7A10Q9NS82 523 aa17.04■□□□□ 0.32
RPUSD3-216ENST00000484134 DHHO43323 396 aa17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 CEACAM1P13688 526 aa17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 EXT1Q16394 746 aa17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 C7orf61Q8IZ16 206 aa17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 MTIF3Q9H2K0 278 aaKnown RBP17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 GNG13Q9P2W3 67 aa17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 MYOTQ9UBF9 498 aa17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 SDK2Q58EX2 2172 aa17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 CHST1O43916 411 aa17.03■□□□□ 0.32
RPUSD3-216ENST00000484134 PAX1P15863 534 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms