RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SCGB3A2Q96PL1 93 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 HS3ST6Q96QI5 342 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 PPA2Q9H2U2 334 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 RIMS4Q9H426 269 aaPredicted RBP22.26■■□□□ 1.15
SHOX2-204ENST00000483851 THBDP07204 575 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 GRPP07492 148 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 NFYAP23511 347 aaPredicted RBP22.26■■□□□ 1.15
SHOX2-204ENST00000483851 CD200P41217 278 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 LY6DQ14210 128 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 RBM39Q14498 530 aaKnown RBP22.26■■□□□ 1.15
SHOX2-204ENST00000483851 SPIN3Q5JUX0 258 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 LY6G6FQ5SQ64 297 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 SLC25A42Q86VD7 318 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 COQ3Q9NZJ6 369 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 DUSP13Q9UII6 198 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 DHRS2Q13268 280 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 OPCMLQ14982 345 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 MSMPQ1L6U9 139 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 FAHD2BQ6P2I3 314 aaPredicted RBP22.25■■□□□ 1.15
SHOX2-204ENST00000483851 FIP1L1Q6UN15 594 aaKnown RBP22.25■■□□□ 1.15
SHOX2-204ENST00000483851 TMED4Q7Z7H5 227 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 WFDC8Q8IUA0 241 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 BATF2Q8N1L9 274 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 FAHD2AQ96GK7 314 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 ZNF488Q96MN9 340 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 HDHD3Q9BSH5 251 aaPredicted RBP22.25■■□□□ 1.15
SHOX2-204ENST00000483851 HES4Q9HCC6 221 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 MSL2Q9HCI7 577 aa22.25■■□□□ 1.15
SHOX2-204ENST00000483851 LINC00862A6NCI5 91 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 SRSF4Q08170 494 aaKnown RBP22.24■■□□□ 1.15
SHOX2-204ENST00000483851 ZNF146Q15072 292 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 LHFPL1Q86WI0 220 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 ELMOD3Q96FG2 381 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 CLEC4MQ9H2X3 399 aaPredicted RBP22.24■■□□□ 1.15
SHOX2-204ENST00000483851 ZNF286AQ9HBT8 521 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 AUP1Q9Y679 476 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 ZBTB25P24278 435 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 ECI1P42126 302 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 ARPC4P59998 168 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 SEC61A1P61619 476 aaKnown RBP22.24■■□□□ 1.15
SHOX2-204ENST00000483851 EXOSC2Q13868 293 aaKnown RBP22.24■■□□□ 1.15
SHOX2-204ENST00000483851 C11orf53Q8IXP5 236 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 EHFQ9NZC4 300 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 IL36RNQ9UBH0 155 aa22.24■■□□□ 1.15
SHOX2-204ENST00000483851 M0R233 179 aa22.23■■□□□ 1.15
SHOX2-204ENST00000483851 CFDP00746 253 aaPredicted RBP22.23■■□□□ 1.15
SHOX2-204ENST00000483851 IFNA7P01567 189 aa22.23■■□□□ 1.15
SHOX2-204ENST00000483851 PDCD1Q15116 288 aa22.23■■□□□ 1.15
SHOX2-204ENST00000483851 LRRC46Q96FV0 321 aa22.23■■□□□ 1.15
SHOX2-204ENST00000483851 DSPP15924 2871 aaKnown RBP22.23■■□□□ 1.15
SHOX2-204ENST00000483851 RPS10-NUDT3A0A1W2PQS6 291 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 OR2AT4A6NND4 320 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 NXPH2O95156 264 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 NAPSAO96009 420 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 C4BPBP20851 252 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 SURF2Q15527 256 aaPredicted RBP22.22■■□□□ 1.15
SHOX2-204ENST00000483851 SHEQ5VZ18 495 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 BRICD5Q6PL45 260 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 C17orf107Q6ZR85 190 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 RNASE6Q93091 150 aaKnown RBP22.22■■□□□ 1.15
SHOX2-204ENST00000483851 MRPL24Q96A35 216 aaKnown RBP22.22■■□□□ 1.15
SHOX2-204ENST00000483851 FN3KRPQ9HA64 309 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 NECAP2Q9NVZ3 263 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 TREM2Q9NZC2 230 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 DPRXA6NFQ7 191 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 IGFBP7Q16270 282 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 Q6P435 159 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 LRP11Q86VZ4 500 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 SUMF2Q8NBJ7 301 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 MAFIPQ8WZ33 124 aa22.22■■□□□ 1.15
SHOX2-204ENST00000483851 IGKV1D-8A0A087WSZ0 117 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 TRBV6-6A0A0A6YYG2 114 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 L7N2F9 121 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 DEGS1O15121 323 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 HLA-GP17693 338 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 CFHR2P36980 270 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 MDH2P40926 338 aaKnown RBP22.21■■□□□ 1.15
SHOX2-204ENST00000483851 TAS2R31P59538 309 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 PCSK4Q6UW60 755 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 WFIKKN1Q96NZ8 548 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 GLS2Q9UI32 602 aa22.21■■□□□ 1.15
SHOX2-204ENST00000483851 SH2D1BO14796 132 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 CD8AP01732 235 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 CLLU1Q5K131 121 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 WDR82Q6UXN9 313 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 LYG2Q86SG7 212 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 PEG10Q86TG7 708 aaKnown RBP22.2■■□□□ 1.14
SHOX2-204ENST00000483851 OR2Z1Q8NG97 314 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 OR5M8Q8NGP6 311 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 OR10Z1Q8NGY1 313 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 TRAV24A0A0B4J272 114 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 A6NLC8 198 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 LEUTXA8MZ59 168 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 ABCD4O14678 606 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 FPR2P25090 351 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 DUSP1P28562 367 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 VHLLQ6RSH7 139 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 DHRS9Q9BPW9 319 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 MRPL37Q9BZE1 423 aaKnown RBP22.2■■□□□ 1.14
SHOX2-204ENST00000483851 RASL12Q9NYN1 266 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms