RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SASH3O75995 380 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 OR2H2O95918 312 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 ELANEP08246 267 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 ATP6V1B2P21281 511 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 CCL1P22362 96 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 VEGFCP49767 419 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 FUT6P51993 359 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 ODF4Q2M2E3 257 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 RBMXL1Q96E39 390 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 HRASLS5Q96KN8 279 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 ABCG5Q9H222 651 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 PPIL3Q9H2H8 161 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 REEP1Q9H902 201 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 GNB4Q9HAV0 340 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 PCDHB16Q9NRJ7 776 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 R4GMQ9 66 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 IGHV3-72A0A0B4J1Y9 119 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 ZNF729A6NN14 1252 aaPredicted RBP8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 NCBP2LA6PVI3 153 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 E2F6O75461 281 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 JTBO76095 146 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 IGHG4P01861 327 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 GP9P14770 177 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 PSMB8P28062 276 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 POU3F4P49335 361 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 CDC42P60953 191 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 GNB1P62873 340 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 MADCAM1Q13477 382 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 SRSF7Q16629 238 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 SPIN3Q5JUX0 258 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 TMEM236Q5W0B7 351 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 OR2T5Q6IEZ7 315 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 ZNF322Q6U7Q0 402 aaPredicted RBP8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 ZNF429Q86V71 674 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 TGIF2LXQ8IUE1 241 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 Q8IYB0 196 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 Q8N6K4 173 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 Q8N9W7 124 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 OR1N2Q8NGR9 330 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 OR2T29Q8NH02 315 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 ASB17Q8WXJ9 295 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 DCUN1D4Q92564 292 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 CMTM5Q96DZ9 223 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 BORCS8Q96FH0 119 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 EAF1Q96JC9 268 aaPredicted RBP8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 OR5B12Q96R08 314 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 HSPB9Q9BQS6 159 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 GON7Q9BXV9 100 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 KLK15Q9H2R5 256 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 MOB1AQ9H8S9 216 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 PLEKHA1Q9HB21 404 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 HMG20AQ9NP66 347 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 EXOSC4Q9NPD3 245 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 LIN7CQ9NUP9 197 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 GLS2Q9UI32 602 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 PSG11Q9UQ72 335 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 GSTK1Q9Y2Q3 226 aa8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 AMMECR1Q9Y4X0 333 aaPredicted RBP8.44□□□□□ -1.06
SMARCC1-205ENST00000483847 IGKV1-12A0A0C4DH73 117 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 KBTBD11-OT1A0A1B0GTJ5 212 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 A0A1W2PPE3 182 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 TCRBV5S2A0A599 114 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 FUOMA2VDF0 154 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 I3L521 148 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 SH2D1BO14796 132 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 LDLRAD4O15165 306 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 SAP30O75446 220 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 IGKV1D-12P01611 117 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 OR8U8P0C7N1 319 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 CGB3P0DN86 165 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 CGB7P0DN87 165 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 REG1BP48304 166 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 GNG10P50151 68 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 RAB7AP51149 207 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 CXCR4P61073 352 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 CDK5Q00535 292 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 SCN1BQ07699 218 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 ZNF616Q08AN1 781 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 KIAA0141Q14154 515 aaPredicted RBP8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 EBI3Q14213 229 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 ATXN7L3Q14CW9 347 aaPredicted RBP8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 KRBOX4Q5JUW0 171 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 CATSPERDQ86XM0 798 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 OR8H3Q8N146 312 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 MYOZ3Q8TDC0 251 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 CHST5Q9GZS9 411 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 PLSCR3Q9NRY6 295 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 MRM2Q9UI43 246 aaKnown RBP8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 SNX5Q9Y5X3 404 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 TMEM14AQ9Y6G1 99 aa8.43□□□□□ -1.06
SMARCC1-205ENST00000483847 IGKV1-9A0A0C4DH69 117 aa8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 OVOL1O14753 267 aa8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 GATBO75879 557 aaKnown RBP8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 RPP14O95059 124 aaKnown RBP8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 HMGN1P05114 100 aa8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 IGHV4-30-4P0DP06 118 aa8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 RBP2P50120 134 aa8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 LTC4SQ16873 150 aa8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 Q6P435 159 aa8.42□□□□□ -1.06
SMARCC1-205ENST00000483847 TMEM179BQ7Z7N9 219 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms