RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SEBOXQ9HB31 216 aaPredicted RBP11.87□□□□□ -0.51
CLK3-204ENST00000483723 NECAP2Q9NVZ3 263 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 TLN1Q9Y490 2541 aaKnown RBP11.87□□□□□ -0.51
CLK3-204ENST00000483723 OR2H2O95918 312 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 OR5H8P0DN80 308 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 ECI1P42126 302 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 SELENOVP59797 346 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 ARPC4P59998 168 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 DHRS2Q13268 280 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 KCNJ8Q15842 424 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 C4orf46Q504U0 113 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 VHLLQ6RSH7 139 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 ACP7Q6ZNF0 438 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 C17orf107Q6ZR85 190 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 GAPTQ8N292 157 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 ADAD2Q8NCV1 583 aaKnown RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 OR2AK2Q8NG84 335 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 OR2Z1Q8NG97 314 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 RNASE6Q93091 150 aaKnown RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 RTBDNQ9BSG5 229 aaPredicted RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 ZNF436Q9C0F3 470 aaPredicted RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 LIME1Q9H400 295 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 C5orf66Q9H5L9 145 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 CA10Q9NS85 328 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 TAAR3PQ9P1P4 343 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 ZNF222Q9UK12 451 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 IGHV3-64DA0A0J9YX35 117 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 SLC33A1O00400 549 aaPredicted RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 ABCD4O14678 606 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 HS3ST1O14792 307 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 SH2D1BO14796 132 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 FABP7O15540 132 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 GSTT2P0CG29 244 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 MDH2P40926 338 aaKnown RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 NPY4RP50391 375 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 TAS2R31P59538 309 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 BSPH1Q075Z2 132 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 SLC22A25Q6T423 547 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 LYG2Q86SG7 212 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 C12orf45Q8N5I9 185 aaPredicted RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 PRR7Q8TB68 274 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
CLK3-204ENST00000483723 RDH5Q92781 318 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 TMEM230Q96A57 120 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 MEGF10Q96KG7 1140 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 WDR13Q9H1Z4 485 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 DLL4Q9NR61 685 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 RASL12Q9NYN1 266 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 MGAT4CQ9UBM8 478 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 CADP27708 2225 aa11.86□□□□□ -0.51
CLK3-204ENST00000483723 CHD3Q12873 2000 aaKnown RBP11.85□□□□□ -0.51
CLK3-204ENST00000483723 C9orf170A2RU37 121 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 A6NLC8 198 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 ZNF44P15621 663 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 HLA-GP17693 338 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 ERP29P30040 261 aaKnown RBP11.85□□□□□ -0.51
CLK3-204ENST00000483723 GATA4P43694 442 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 PPP1R1AQ13522 171 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 C2orf68Q2NKX9 166 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 NCMAPQ5T1S8 102 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
CLK3-204ENST00000483723 NLRC3Q7RTR2 1065 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 ELMOD3Q96FG2 381 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 ZNF486Q96H40 463 aaPredicted RBP11.85□□□□□ -0.51
CLK3-204ENST00000483723 ZNF2Q9BSG1 426 aaPredicted RBP11.85□□□□□ -0.51
CLK3-204ENST00000483723 COQ3Q9NZJ6 369 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 ATP23Q9Y6H3 246 aa11.85□□□□□ -0.51
CLK3-204ENST00000483723 PKD1L2Q7Z442 2459 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 PLSCR5A0PG75 271 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 WNT9BO14905 357 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 ATXN7O15265 892 aaPredicted RBP11.84□□□□□ -0.51
CLK3-204ENST00000483723 KNG1P01042 644 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 ADH4P08319 380 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 TMEM128Q5BJH2 165 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 C20orf204Q6ZNR8 217 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 MITD1Q8WV92 249 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 RANBP3Q9H6Z4 567 aaPredicted RBP11.84□□□□□ -0.51
CLK3-204ENST00000483723 TMEM165Q9HC07 324 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 CHMP1AQ9HD42 196 aaPredicted RBP11.84□□□□□ -0.51
CLK3-204ENST00000483723 UFSP2Q9NUQ7 469 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 C1orf123Q9NWV4 160 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 GLS2Q9UI32 602 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 ZDHHC8Q9ULC8 765 aa11.84□□□□□ -0.51
CLK3-204ENST00000483723 CHD6Q8TD26 2715 aa11.83□□□□□ -0.51
CLK3-204ENST00000483723 KIR2DS1A0A191URI9 304 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 SRRM5B3KS81 715 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 TRDCB7Z8K6 153 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 H7C1Q1 480 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 IFNL4K9M1U5 179 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 HAND1O96004 215 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 LHBP01229 141 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 CTSDP07339 412 aaPredicted RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 GIPP09681 153 aaPredicted RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 GLRA1P23415 457 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 KIR2DS4P43632 304 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 ZNF81P51508 661 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms