RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 IGLV6-57P01721 117 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 CCL2P13500 99 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 CRATP43155 626 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 ACOT2P49753 483 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 FADDQ13158 208 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 ITGB3BPQ13352 177 aaPredicted RBP2.64□□□□□ -1.99
SF3B1-210ENST00000482158 RGS21Q2M5E4 152 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 Q499Y3 187 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 DEFB134Q4QY38 66 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 CLEC12AQ5QGZ9 265 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 SAPCD1Q5SSQ6 148 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 OR2M4Q96R27 311 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 POTEKPQ9BYX7 375 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 PRRG3Q9BZD7 231 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 UPF3BQ9BZI7 483 aaKnown RBP2.64□□□□□ -1.99
SF3B1-210ENST00000482158 PLA2G12AQ9BZM1 189 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 TSGA10Q9BZW7 698 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 SRRQ9GZT4 340 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 RMND1Q9NWS8 449 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 TAC3Q9UHF0 121 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 ENPP5Q9UJA9 477 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 TTC21AQ8NDW8 1320 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 GOLGA8IPA6NC78 632 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 GMNCA6NCL1 334 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 OR5K4A6NMS3 321 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 H3BQ85 93 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 TCAPO15273 167 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 ENTPD6O75354 484 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 ZMPSTE24O75844 475 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 HLA-DRAP01903 254 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 LGALS3P17931 250 aaKnown RBP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 M6PRP20645 277 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 IMPA1P29218 277 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 POLR2GP62487 172 aaKnown RBP eCLIP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 MEF2BQ02080 365 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 C2orf80Q0P641 193 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 BIKQ13323 160 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 TNXAQ16473 311 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF660Q6AZW8 331 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 USP50Q70EL3 339 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 LINC00596Q86U02 117 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 ST13P4Q8IZP2 240 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 SELENOHQ8IZQ5 122 aaKnown RBP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 OR8J2Q8NGG1 315 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 OR6K2Q8NGY2 324 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 OR8S1Q8NH09 359 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 LGALS14Q8TCE9 139 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 C22orf15Q8WYQ4 148 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 HINT2Q9BX68 163 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 WDR55Q9H6Y2 383 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 TIMM22Q9Y584 194 aa2.63□□□□□ -1.99
SF3B1-210ENST00000482158 PUS1Q9Y606 427 aaKnown RBP eCLIP2.63□□□□□ -1.99
SF3B1-210ENST00000482158 POLR3AO14802 1390 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-210ENST00000482158 NACADO15069 1562 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 GOLGA8QA0A0J9YX86 632 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 C1orf232A0A0U1RR37 186 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 A0A1B0GXF2 115 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 GYG2O15488 501 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 CDK1P06493 297 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 NQO2P16083 231 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 CD40LGP29965 261 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 RWDD2BP57060 319 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 KLF3P57682 345 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-210ENST00000482158 TNNC1P63316 161 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 ENDOGQ14249 297 aaKnown RBP2.62□□□□□ -1.99
SF3B1-210ENST00000482158 IHHQ14623 411 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 CASP8Q14790 479 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 VAMP3Q15836 100 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 PDZD11Q5EBL8 140 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF470Q6ECI4 717 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 CYP4Z1Q86W10 505 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 STX12Q86Y82 276 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 OR7G1Q8NGA0 311 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 OR51Q1Q8NH59 317 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 CCL17Q92583 94 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 PPP1R14BQ96C90 147 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF514Q96K75 400 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-210ENST00000482158 PARD6GQ9BYG4 376 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-210ENST00000482158 NDEL1Q9GZM8 345 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 VCX3AQ9NNX9 186 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 NLE1Q9NVX2 485 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-210ENST00000482158 NKIRAS1Q9NYS0 192 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 RBMX2Q9Y388 322 aaKnown RBP2.62□□□□□ -1.99
SF3B1-210ENST00000482158 HIVEP2P31629 2446 aa2.62□□□□□ -1.99
SF3B1-210ENST00000482158 NOS1P29475 1434 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 E7EWF7 191 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 C15orf65H3BRN8 121 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 GOLGA8RI6L899 631 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 GPR171O14626 319 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 SCN2BO60939 215 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 AHSA1O95433 338 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 TRGV3P03979 118 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 CCNOP22674 350 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 PSMB6P28072 239 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 CBX5P45973 191 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 NUDT2P50583 147 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 TMEM241Q24JQ0 296 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 C18orf21Q32NC0 220 aaPredicted RBP2.61□□□□□ -1.99
SF3B1-210ENST00000482158 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 ATP6AP1LQ52LC2 224 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms