RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 SPRNQ5BIV9 151 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 DCDC5Q6ZRR9 648 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 C6orf201Q7Z4U5 140 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 IZUMO1Q8IYV9 350 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 OR8H2Q8N162 312 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 GAPTQ8N292 157 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 ZCCHC24Q8N2G6 241 aaKnown RBP8.52□□□□□ -1.05
USP39-215ENST00000481409 TOMM5Q8N4H5 51 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 YIPF5Q969M3 257 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 TRIM63Q969Q1 353 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 CMSS1Q9BQ75 279 aaKnown RBP8.52□□□□□ -1.05
USP39-215ENST00000481409 WDR13Q9H1Z4 485 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 RAB9BQ9NP90 201 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 IFT46Q9NQC8 304 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 ZNF222Q9UK12 451 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 KCNK7Q9Y2U2 307 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 IGKV1D-17A0A075B6S4 117 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 IGHV3-64DA0A0J9YX35 117 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 J3QRK9 145 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 K7N7A8 449 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 NDUFS8O00217 210 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 TNFRSF13BO14836 293 aaPredicted RBP8.51□□□□□ -1.05
USP39-215ENST00000481409 MGST3O14880 152 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 WNT9BO14905 357 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 SIGLEC5O15389 551 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 ORC5O43913 435 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 NAPSAO96009 420 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 CYB5R3P00387 301 aaPredicted RBP8.51□□□□□ -1.05
USP39-215ENST00000481409 EGR1P18146 543 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 GDNFP39905 211 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 TAS2R19P59542 299 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 IL13RA1P78552 427 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 BAK1Q16611 211 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 NKAPLQ5M9Q1 402 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 SLC35E4Q6ICL7 350 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 TRAT1Q6PIZ9 186 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 ZNF788Q6ZQV5 615 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 TRAPPC6BQ86SZ2 158 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 HOGA1Q86XE5 327 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 SPICQ8N5J4 248 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 TMEM229BQ8NBD8 167 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 MINDY2Q8NBR6 621 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 OR52I2Q8NH67 350 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 SULT4A1Q9BR01 284 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 FAAP24Q9BTP7 215 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 GSX2Q9BZM3 304 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 ETAA1Q9NY74 926 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 LPAR3Q9UBY5 353 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 MIOXQ9UGB7 285 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 OR14J1Q9UGF5 321 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 OPN4Q9UHM6 478 aa8.51□□□□□ -1.05
USP39-215ENST00000481409 PKDREJQ9NTG1 2253 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 KIR2DS1A0A191URI9 304 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ANKRD20A5PA0PJZ0 165 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 TMEM30CPA0ZSE6 113 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ZNF737O75373 536 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 IGHV2-70P01814 119 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ROS1P08922 2347 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 CTXN2P0C2S0 81 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 GIFP27352 417 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 KIR2DS4P43632 304 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 GABRA2P47869 451 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 NPY4RP50391 375 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 TAS2R46P59540 309 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 DGCR2P98153 550 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 CACNA1DQ01668 2161 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 COL10A1Q03692 680 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ASAH1Q13510 395 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 MEF2DQ14814 521 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 KIR2DS1Q14954 304 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ZMYND11Q15326 602 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ZNF787Q6DD87 383 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 MZT2BQ6NZ67 158 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ZNF497Q6ZNH5 498 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 LYSMD2Q8IV50 215 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 CD177Q8N6Q3 437 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 NEK7Q8TDX7 302 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 NINJ1Q92982 152 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 COX4I2Q96KJ9 171 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 DMRTB1Q96MA1 342 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ZMAT3Q9HA38 289 aaKnown RBP8.5□□□□□ -1.05
USP39-215ENST00000481409 ZNF286AQ9HBT8 521 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 TMEM165Q9HC07 324 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 ABCB10Q9NRK6 738 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 BEX4Q9NWD9 120 aaPredicted RBP8.5□□□□□ -1.05
USP39-215ENST00000481409 IL36RNQ9UBH0 155 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 KLK11Q9UBX7 282 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 AK3Q9UIJ7 227 aa8.5□□□□□ -1.05
USP39-215ENST00000481409 A0A1W2PQ09 198 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 MEIOCA2RUB1 952 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 C3orf80F5H4A9 247 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 SIRPB1O00241 398 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 SSX5O60225 188 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 PTTG1O95997 202 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 TK1P04183 234 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 CD74P04233 296 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 FCGR3AP08637 254 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 COL8A2P25067 703 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 DUSP1P28562 367 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms