RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 TMEM31Q5JXX7 168 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 TEX43Q6ZNM6 134 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 H1FNTQ75WM6 255 aaPredicted RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 WDFY1Q8IWB7 410 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 TMEM37Q8WXS4 190 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 ZCCHC14Q8WYQ9 949 aaKnown RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 ANAPC16Q96DE5 110 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 BMFQ96LC9 184 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 SMIM7Q9BQ49 75 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 HDHD3Q9BSH5 251 aaPredicted RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 OR2J1Q9GZK6 312 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 MAP1LC3BQ9GZQ8 125 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 GPR35Q9HC97 309 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 ZNF319Q9P2F9 582 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 FUT9Q9Y231 359 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 B3GALT1Q9Y5Z6 326 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 PLRG1O43660 514 aaKnown RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 CST7O76096 145 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 IGLV3-1P01715 115 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 UCP1P25874 307 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 ERVS71-1P61550 626 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 RBX1P62877 108 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 GNB2P62879 340 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 C2orf27AQ580R0 203 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 NUFIP2Q7Z417 695 aaKnown RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 OR5D18Q8NGL1 313 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 OR2T10Q8NGZ9 312 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 ADIPOR1Q96A54 375 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 MS4A10Q96PG2 267 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 TP53RKQ96S44 253 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 TBX15Q96SF7 602 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 PCGF1Q9BSM1 259 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 PSMG3Q9BT73 122 aaPredicted RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 REPIN1Q9BWE0 567 aaKnown RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 MSL2Q9HCI7 577 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 RPRMQ9NS64 109 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 VDAC3Q9Y277 283 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 C3orf85A0A1B0GTC6 90 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 A0A1W2PPQ1 181 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 TMEM250H0YL14 139 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 MPPED1O15442 326 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 SIAH2O43255 324 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 YPEL1O60688 119 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 IFNA5P01569 189 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 TUBG1P23258 451 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 OR1D4P47884 311 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 ZNF41P51814 821 aaPredicted RBP9.23□□□□□ -0.93
SIK3-210ENST00000480468 FXYD4P59646 89 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 NFATC4Q14934 902 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 ALKBH2Q6NS38 261 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 CPEB2Q7Z5Q1 589 aaKnown RBP9.23□□□□□ -0.93
SIK3-210ENST00000480468 CCL4L1Q8NHW4 92 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 PP6455Q8WZ26 134 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 YPEL2Q96QA6 119 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 OR51I2Q9H344 312 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 HRASLS2Q9NWW9 162 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 ATG2AQ2TAZ0 1938 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 TSPAN2O60636 221 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 PIAS2O75928 621 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 TMEM50AO95807 157 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 SELEP16581 610 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 IL12BP29460 328 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 RPL23P62829 140 aaKnown RBP9.23□□□□□ -0.93
SIK3-210ENST00000480468 POU3F1Q03052 451 aaPredicted RBP9.23□□□□□ -0.93
SIK3-210ENST00000480468 OR5I1Q13606 314 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 EXT1Q16394 746 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 Q6ZSR3 168 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 OOSP2Q86WS3 158 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 C17orf78Q8N4C9 275 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 C22orf15Q8WYQ4 148 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 FAM131CQ96AQ9 280 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 DDIT4LQ96D03 193 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 SIGLEC12Q96PQ1 595 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 MRPL13Q9BYD1 178 aaKnown RBP9.23□□□□□ -0.93
SIK3-210ENST00000480468 PLK3Q9H4B4 646 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 FAM60AQ9NP50 221 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 AURKAIP1Q9NWT8 199 aaPredicted RBP9.23□□□□□ -0.93
SIK3-210ENST00000480468 RNF186Q9NXI6 227 aa9.23□□□□□ -0.93
SIK3-210ENST00000480468 CEBPZOSA8MTT3 80 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 SEMA4FO95754 770 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 CTSBP07858 339 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 HNRNPA1P09651 372 aaKnown RBP eCLIP9.22□□□□□ -0.93
SIK3-210ENST00000480468 IL11P20809 199 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 CTSSP25774 331 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 EPHA8P29322 1005 aaPredicted RBP9.22□□□□□ -0.93
SIK3-210ENST00000480468 SOX8P57073 446 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 HERV-K104P61576 105 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 GRB2P62993 217 aaKnown RBP9.22□□□□□ -0.93
SIK3-210ENST00000480468 GABREP78334 506 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 SERF2P84101 59 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 ZNF154Q13106 437 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 ZNF726P1Q15940 193 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 MEX3BQ6ZN04 569 aaKnown RBP9.22□□□□□ -0.93
SIK3-210ENST00000480468 FAM57BQ71RH2 274 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 TMEM217Q8N7C4 229 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 OR11L1Q8NGX0 322 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 C10orf35Q96D05 121 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 DNAJC4Q9NNZ3 241 aa9.22□□□□□ -0.93
SIK3-210ENST00000480468 PNRC2Q9NPJ4 139 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms