RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 GRB2P62993 217 aaKnown RBP11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 RUNX1Q01196 453 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 GAMTQ14353 236 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 PIGYQ3MUY2 71 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 DMRTC2Q8IXT2 367 aaPredicted RBP11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 CCDC54Q8NEL0 328 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 OR4D5Q8NGN0 318 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 MAFAQ8NHW3 353 aaPredicted RBP11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 ZNF700Q9H0M5 742 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 UFSP2Q9NUQ7 469 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 NECAP2Q9NVZ3 263 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 SIT1Q9Y3P8 196 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 A0A1B0GW64 132 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 FAM230AA0A1W2PPH8 454 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 NKX2-6A6NCS4 301 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 CYB5BO43169 146 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 ZIC3O60481 467 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 ENDOGQ14249 297 aaKnown RBP11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 IL13RA2Q14627 380 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 KHDC3LQ587J8 217 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 RAET1LQ5VY80 246 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 SLC22A25Q6T423 547 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 BATF2Q8N1L9 274 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 RBM24Q9BX46 236 aaKnown RBP11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 PRDM6Q9NQX0 595 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 PPP1R14DQ9NXH3 145 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 PTRH2Q9Y3E5 179 aaKnown RBP11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 ZDBF2Q9HCK1 2354 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 A0A0G2JMM0 328 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 A0A1W2PPB8 328 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 A0A1W2PRS3 328 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 KIR3DP1A8MWS1 328 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 GEMIN2O14893 280 aaKnown RBP11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 ZNHIT1O43257 154 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 CA11O75493 328 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 NXPH3O95157 252 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 PATE4P0C8F1 98 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 RGS19P49795 217 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 H3F3AP84243 136 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 P4HA3Q7Z4N8 544 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 ZNF429Q86V71 674 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 OR2C3Q8N628 320 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 LRTM2Q8N967 370 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 LFNGQ8NES3 379 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 TMEM68Q96MH6 324 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 GLRX2Q9NS18 164 aa11.51□□□□□ -0.57
PDZRN3-208ENST00000479530 KLF7O75840 302 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 CST7O76096 145 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 CFIP05156 583 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 ICAM4Q14773 271 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 ODF3L1Q8IXM7 274 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 IFI44Q8TCB0 444 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 HLA-CQ95604 372 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 MEGF10Q96KG7 1140 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 PRO1933Q9H354 126 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 TNFSF11O14788 317 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 HIST1H1BP16401 226 aaKnown RBP11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 ZNF133P52736 654 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 NUBP1P53384 320 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 KCNMB1Q16558 191 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 C4orf17Q53FE4 359 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 TMEM217Q8N7C4 229 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 OR10AD1Q8NGE0 317 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 PP6455Q8WZ26 134 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 NABP1Q96AH0 204 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 S100PBPQ96BU1 408 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 SUCNR1Q9BXA5 334 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 C11orf1Q9H5F2 150 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 OPA3Q9H6K4 179 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 IGHV1-45A0A0A0MS14 117 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 A0A0J9YW62 118 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 PROB1E7EW31 1015 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 JMJD7P0C870 316 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 PPA1Q15181 289 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 RSU1Q15404 277 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 C21orf62-AS1Q17RA5 79 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 CXorf66Q5JRM2 361 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 LGI3Q8N145 548 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 ADPRHL1Q8NDY3 354 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 ABHD5Q8WTS1 349 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 IMMP1LQ96LU5 166 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 DUSP23Q9BVJ7 150 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 SRXN1Q9BYN0 137 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 SLC7A11Q9UPY5 501 aa11.5□□□□□ -0.57
PDZRN3-208ENST00000479530 IGKV1-12A0A0C4DH73 117 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 A0A0U1RQV5 110 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 SEC14L6B5MCN3 397 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 SSSCA1O60232 199 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 SCAF4O95104 1147 aaKnown RBP11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 TMEM50AO95807 157 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 F10P00742 488 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 IGKV1D-12P01611 117 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 COX6A1P12074 109 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 FABP4P15090 132 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 AADACP22760 399 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 CTSSP25774 331 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 GNMTQ14749 295 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 ARL6IP1Q15041 203 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms