RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 SLC25A45Q8N413 288 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 ZIC4Q8N9L1 334 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 MNS1Q8NEH6 495 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 LFNGQ8NES3 379 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 TMEM56Q96MV1 263 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 C7orf50Q9BRJ6 194 aaKnown RBP3□□□□□ -1.93
UPF3B-203ENST00000478840 SLC25A31Q9H0C2 315 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 COMMD9Q9P000 198 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 PSMD13Q9UNM6 376 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 ZNF780BQ9Y6R6 833 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 RAB3GAP2Q9H2M9 1393 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 IGHV2-26A0A0B4J1V2 119 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 TRAV8-2A0A0B4J237 113 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 PRAMEF26H0Y7S4 382 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 KLRC4-KLRK1H3BQV0 150 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 SLC31A1O15431 190 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 TCF21O43680 179 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 CYTH3O43739 400 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 ORM1P02763 201 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 ZNF32P17041 273 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 SLC6A1P30531 599 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 TGM4P49221 684 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 FAM3AP98173 230 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 MRPL2Q5T653 305 aaKnown RBP2.99□□□□□ -1.93
UPF3B-203ENST00000478840 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 FA2HQ7L5A8 372 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 C10orf107Q8IVU9 208 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 OR5L1Q8NGL2 311 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 KLF14Q8TD94 323 aaPredicted RBP2.99□□□□□ -1.93
UPF3B-203ENST00000478840 PEBP4Q96S96 227 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 ZNF426Q9BUY5 554 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 TAPBPLQ9BX59 468 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 UGT2B28Q9BY64 529 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 ING2Q9H160 280 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 FAM60AQ9NP50 221 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 TMEM38BQ9NVV0 291 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 MIA3Q5JRA6 1907 aa2.99□□□□□ -1.93
UPF3B-203ENST00000478840 BAZ2AQ9UIF9 1905 aaKnown RBP2.98□□□□□ -1.93
UPF3B-203ENST00000478840 CEACAM18A8MTB9 384 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 A8MUU9 505 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 TMEM250H0YL14 139 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.98□□□□□ -1.93
UPF3B-203ENST00000478840 H3BP45 60 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 SOD3P08294 240 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 OR5AC1P0C628 307 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 IDH2P48735 452 aaKnown RBP2.98□□□□□ -1.93
UPF3B-203ENST00000478840 NUDT2P50583 147 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 RPL14P50914 215 aaKnown RBP2.98□□□□□ -1.93
UPF3B-203ENST00000478840 DLX6P56179 175 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 FAM45BPQ6NSW5 357 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 NEGR1Q7Z3B1 354 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 ATP6V1C2Q8NEY4 427 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 OR2M3Q8NG83 312 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 SUN5Q8TC36 379 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 CASTOR1Q8WTX7 329 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 ARL5BQ96KC2 179 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 PPP1R36Q96LQ0 422 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 LINC00477Q96M19 166 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 OLFM3Q96PB7 478 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 PARVGQ9HBI0 331 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 HMGXB4Q9UGU5 601 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 SVILO95425 2214 aa2.98□□□□□ -1.93
UPF3B-203ENST00000478840 ATRNO75882 1429 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 IGHV3OR16-8A0A075B7F1 116 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 IZUMO1RA6ND01 250 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 C8orf87E5RJ46 101 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 F5H5K5 113 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 RPL36A-HNRNPH2H7BZ11 118 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 PSIP1O75475 530 aaKnown RBP2.97□□□□□ -1.93
UPF3B-203ENST00000478840 EPPINO95925 133 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 IGKV3-11P04433 115 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 SPNP16150 400 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 AZU1P20160 251 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 TGFBR1P36897 503 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 EXOC3L4Q17RC7 722 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 GOLGA7BQ2TAP0 167 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 SDHAF4Q5VUM1 108 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 C16orf47Q6ZP98 133 aaPredicted RBP2.97□□□□□ -1.93
UPF3B-203ENST00000478840 CLEC20AQ6ZU45 233 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 MUC15Q8N387 334 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 ZNF709Q8N972 641 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 ITLN2Q8WWU7 325 aaPredicted RBP2.97□□□□□ -1.93
UPF3B-203ENST00000478840 LINC01587Q99440 93 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 C1orf50Q9BV19 199 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 OR51E2Q9H255 320 aa2.97□□□□□ -1.93
UPF3B-203ENST00000478840 C14orf166Q9Y224 244 aaKnown RBP2.97□□□□□ -1.93
UPF3B-203ENST00000478840 ZNF706Q9Y5V0 76 aaPredicted RBP2.97□□□□□ -1.93
UPF3B-203ENST00000478840 YEATS2Q9ULM3 1422 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 GOLGA6L4A6NEF3 574 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 EFCAB9A8MZ26 197 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 FTCDNL1E5RQL4 147 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 GPR171O14626 319 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 CXorf1O96002 111 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 PET100P0DJ07 73 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 SCGB1C2P0DMR2 95 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 AKR1C4P17516 323 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 CNTFRP26992 372 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 SLC25A34Q6PIV7 304 aa2.96□□□□□ -1.94
UPF3B-203ENST00000478840 FUNDC1Q8IVP5 155 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms