RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 RBM11P57052 281 aaKnown RBP8.44□□□□□ -1.06
HDAC6-222ENST00000478095 ERVFRD-1P60508 538 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 KLRD1Q13241 179 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 ATXN7L3Q14CW9 347 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-222ENST00000478095 TMEM200BQ69YZ2 307 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 LYPD6Q86Y78 171 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 CMTM4Q8IZR5 234 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 OSR2Q8N2R0 312 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 BPIFB2Q8N4F0 458 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 Q8N7P7 452 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 PHYHIPQ92561 330 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 SLITRK2Q9H156 845 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 BANF2Q9H503 90 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 IL36GQ9NZH8 169 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 ST3GAL6Q9Y274 331 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 KPTNQ9Y664 436 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 JMJD1CQ15652 2540 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 A0A0G2JK05 382 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 CENPVL3A0A0U1RRI6 287 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 MDFIC2A0A1B0GVS7 189 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 MEGF11A6BM72 1044 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 MGST3O14880 152 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 GEMIN2O14893 280 aaKnown RBP8.43□□□□□ -1.06
HDAC6-222ENST00000478095 CRTAPO75718 401 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-222ENST00000478095 OR7C1O76099 320 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-222ENST00000478095 TNFAIP8O95379 198 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 GTF2F2P13984 249 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 BMXP51813 675 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 IL13RA2Q14627 380 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 PAN3Q58A45 887 aaKnown RBP8.43□□□□□ -1.06
HDAC6-222ENST00000478095 GPR157Q5UAW9 335 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 GLT8D1Q68CQ7 371 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 C22orf42Q6IC83 251 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 TCF23Q7RTU1 214 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 KIR3DL3Q8N743 410 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 TMEM104Q8NE00 496 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 Q8NFD4 153 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 OR51T1Q8NGJ9 327 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 OR5D13Q8NGL4 314 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 PPP1R35Q8TAP8 253 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 TBC1D15Q8TC07 691 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 FAM46BQ96A09 425 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 C1orf147Q96MC9 270 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-222ENST00000478095 GFI1Q99684 422 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 UQCC2Q9BRT2 126 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 MS4A7Q9GZW8 240 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-222ENST00000478095 KCNK15Q9H427 330 aa8.43□□□□□ -1.06
HDAC6-222ENST00000478095 SEBOXQ9HB31 216 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-222ENST00000478095 AK6Q9Y3D8 172 aaKnown RBP8.43□□□□□ -1.06
HDAC6-222ENST00000478095 TRAV24A0A0B4J272 114 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 SHISA3A0PJX4 238 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 RNASEK-C17orf49H0YIS7 233 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 M0R1W7 72 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF780AO75290 641 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-222ENST00000478095 MGMTP16455 207 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 FPR2P25090 351 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 LMO1P25800 156 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 GLIPR1P48060 266 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 P2RX3P56373 397 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 AESQ08117 197 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 SCGB2A2Q13296 93 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 BLMHQ13867 455 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 P2RY14Q15391 338 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 TAF9Q16594 264 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 ATAD3CQ5T2N8 411 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 OR10K2Q6IF99 312 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 CD200R1LQ6Q8B3 271 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF782Q6ZMW2 699 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-222ENST00000478095 TRAPPC6BQ86SZ2 158 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 CDH26Q8IXH8 852 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 PNKDQ8N490 385 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 CHST4Q8NCG5 386 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 TSPAN14Q8NG11 270 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 COQ2Q96H96 371 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 CYYR1Q96J86 154 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 SELENOIQ9C0D9 397 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 METTL8Q9H825 291 aaKnown RBP8.42□□□□□ -1.06
HDAC6-222ENST00000478095 PLGRKTQ9HBL7 147 aa8.42□□□□□ -1.06
HDAC6-222ENST00000478095 CUBNO60494 3623 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 A0A087WXM4 84 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 IGHV1-69DA0A0B4J2H0 117 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 TRDV1A0A1B0GX56 115 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 A0A1W2PPH5 198 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 hADV38S2A0JD32 116 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 SMIM30A4D0T7 59 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 SLC22A1O15245 554 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 TCF21O43680 179 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 VENTXO95231 258 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 MPIG6BO95866 241 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 IGHV1-69P01742 117 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 COX7A1P24310 79 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 MYL9P24844 172 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 HTR2CP28335 458 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 DLX6P56179 175 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 CLDN12P56749 244 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 OR10A3P58181 314 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 GPR176Q14439 515 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 NHLRC3Q5JS37 347 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 KRBOX4Q5JUW0 171 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 C1orf100Q5SVJ3 147 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms