RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 S100GP29377 79 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 CFHR2P36980 270 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 NPBWR2P48146 333 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 HERV-K104P61576 105 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 KLRB1Q12918 225 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 ZNF154Q13106 437 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 DMRTC1Q5HYR2 192 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 ZNF660Q6AZW8 331 aaPredicted RBP6.76□□□□□ -1.33
VMA21-203ENST00000477649 GSG1LQ6UXU4 331 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 NCCRP1Q6ZVX7 275 aaPredicted RBP6.76□□□□□ -1.33
VMA21-203ENST00000477649 CISD2Q8N5K1 135 aaKnown RBP6.76□□□□□ -1.33
VMA21-203ENST00000477649 SCCPDHQ8NBX0 429 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 NAXEQ8NCW5 288 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 BHLHE23Q8NDY6 225 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 OR52B4Q8NGK2 314 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 OR4A4PQ8NGN8 299 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 PRR7Q8TB68 274 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 FAM216AQ8WUB2 273 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 MRGPRFQ96AM1 343 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 S100PBPQ96BU1 408 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 MOB3AQ96BX8 217 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 VKORC1Q9BQB6 163 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 ZNF2Q9BSG1 426 aaPredicted RBP6.76□□□□□ -1.33
VMA21-203ENST00000477649 NMES1Q9C002 83 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 C5orf66Q9H5L9 145 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 HES4Q9HCC6 221 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 Q9N2K0 584 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 ZFP57Q9NU63 452 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 C1orf123Q9NWV4 160 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 JKAMPQ9P055 326 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 PCDHB10Q9UN67 800 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 MEMO1Q9Y316 297 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 ATP23Q9Y6H3 246 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 A0A1W2PR80 420 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 OR5H14A6NHG9 310 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 TUBAL3A6NHL2 446 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 NPIPB11E5RHQ5 1161 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 M0R233 179 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 ZZEF1O43149 2961 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 SYNGR1O43759 233 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 NXPH2O95156 264 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 KNG1P01042 644 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 IFNA2P01563 188 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 IFNA7P01567 189 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 PET100P0DJ07 73 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 ZNF728P0DKX0 622 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 SLC25A4P12235 298 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 RPA2P15927 270 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 AKR1C4P17516 323 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 LMO1P25800 156 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 RBMXP38159 391 aaKnown RBP6.75□□□□□ -1.33
VMA21-203ENST00000477649 CD200P41217 278 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 NPY4RP50391 375 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 H2BFSP57053 126 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 RND3P61587 244 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 NKX6-1P78426 367 aaPredicted RBP6.75□□□□□ -1.33
VMA21-203ENST00000477649 IFITM2Q01629 132 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 PAX5Q02548 391 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 ABCA11PQ4W5N1 156 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 ESCO2Q56NI9 601 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 SPATA46Q5T0L3 261 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 LAMTOR1Q6IAA8 161 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 ZNF880Q6PDB4 577 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 SLC22A25Q6T423 547 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 TMEM108Q6UXF1 575 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 KCTD9Q7L273 389 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 MYPOPQ86VE0 399 aaPredicted RBP6.75□□□□□ -1.33
VMA21-203ENST00000477649 MED12LQ86YW9 2145 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 GAPTQ8N292 157 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 SUMF2Q8NBJ7 301 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 NUP37Q8NFH4 326 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 PPP1R35Q8TAP8 253 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 NEK7Q8TDX7 302 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 RND1Q92730 232 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 ERGIC1Q969X5 290 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 SNRNP40Q96DI7 357 aaKnown RBP6.75□□□□□ -1.33
VMA21-203ENST00000477649 GALNT14Q96FL9 552 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 LRRC46Q96FV0 321 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 FAM210AQ96ND0 272 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 DIRC2Q96SL1 478 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 RTBDNQ9BSG5 229 aaPredicted RBP6.75□□□□□ -1.33
VMA21-203ENST00000477649 PDCD10Q9BUL8 212 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 DPCDQ9BVM2 203 aaPredicted RBP6.75□□□□□ -1.33
VMA21-203ENST00000477649 SUCNR1Q9BXA5 334 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 CHIAQ9BZP6 476 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 OR51B6Q9H340 312 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 CA10Q9NS85 328 aa6.75□□□□□ -1.33
VMA21-203ENST00000477649 ZNF230Q9UIE0 474 aaPredicted RBP6.75□□□□□ -1.33
VMA21-203ENST00000477649 FREM1Q5H8C1 2179 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 IGLV3-9A0A075B6K5 115 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 A0A0D9SG52 128 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 A0A0G2JNJ9 132 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 CRYM-AS1A6NIL9 109 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 C1QTNF9BB2RNN3 333 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 EEF1E1-BLOC1S5C9J1V9 151 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 L7N2F9 121 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 SDCBPO00560 298 aaPredicted RBP6.74□□□□□ -1.33
VMA21-203ENST00000477649 LILRA1O75019 489 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 OR2F2O95006 317 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms