RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TMEM251Q8N6I4 163 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 OR2A7Q96R45 310 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 GPR27Q9NS67 375 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 A0A1B0GTI1 187 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 A0A1W2PNV4 684 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 C5orf63A6NC05 138 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 TUBAL3A6NHL2 446 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 J3KRW8 73 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 ZIC3O60481 467 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 ACTL6BO94805 426 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 AGFG2O95081 481 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 CST4P01036 141 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 PPYP01298 95 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 CTXN2P0C2S0 81 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 PDLIM3Q53GG5 364 aaPredicted RBP9.59□□□□□ -0.87
COL27A1-204ENST00000477421 SPINK9Q5DT21 86 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 AVPI1Q5T686 147 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 GAPTQ8N292 157 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 PTX4Q96A99 478 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 OR5B12Q96R08 314 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 GPR132Q9UNW8 380 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 TMEM14DPA8MWL7 114 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 UMODP07911 640 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 SFTA3P0C7M3 94 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 ACKR3P25106 362 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 SUCLG1P53597 346 aaKnown RBP9.59□□□□□ -0.87
COL27A1-204ENST00000477421 TMEM267Q0VDI3 215 aaPredicted RBP9.59□□□□□ -0.87
COL27A1-204ENST00000477421 PJVKQ0ZLH3 352 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 FAHD2BQ6P2I3 314 aaPredicted RBP9.59□□□□□ -0.87
COL27A1-204ENST00000477421 ZADH2Q8N4Q0 377 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 FRZBQ92765 325 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 FAHD2AQ96GK7 314 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 NUDT16L1Q9BRJ7 211 aaKnown RBP9.59□□□□□ -0.87
COL27A1-204ENST00000477421 TTTY12Q9BZ98 90 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 SMCO4Q9NRQ5 59 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 HEATR1Q9H583 2144 aaKnown RBP9.59□□□□□ -0.87
COL27A1-204ENST00000477421 M0R1B8 84 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 M0R296 226 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 TLE4Q04727 773 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 LRRK1Q38SD2 2015 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 SPG11Q96JI7 2443 aa9.59□□□□□ -0.87
COL27A1-204ENST00000477421 CEACAM6P40199 344 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 PDZD11Q5EBL8 140 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 PPP1R32Q7Z5V6 425 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 C17orf82Q86X59 251 aaPredicted RBP9.58□□□□□ -0.88
COL27A1-204ENST00000477421 TPRX1Q8N7U7 411 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 CLDN23Q96B33 292 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 SARAFQ96BY9 339 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 IP6K3Q96PC2 410 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 MSL2Q9HCI7 577 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 TREM2Q9NZC2 230 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 A0A0U1RQV5 110 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 LNP1A1A4G5 178 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 TRIM77I1YAP6 450 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 SPINT2O43291 252 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 CRYAAP02489 173 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 CTSDP07339 412 aaPredicted RBP9.58□□□□□ -0.88
COL27A1-204ENST00000477421 METTL15P1P0C7V9 234 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 S100PP25815 95 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF83P51522 516 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 P2RY4P51582 365 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 ENDOGQ14249 297 aaKnown RBP9.58□□□□□ -0.88
COL27A1-204ENST00000477421 TBC1D26Q86UD7 250 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 OR2C3Q8N628 320 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF441Q8N8Z8 693 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 OR2Z1Q8NG97 314 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 ASB13Q8WXK3 278 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 ISOC2Q96AB3 205 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 PIK3IP1Q96FE7 263 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 MRPL13Q9BYD1 178 aaKnown RBP9.58□□□□□ -0.88
COL27A1-204ENST00000477421 PRR14LQ5THK1 2151 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 PIEZO2Q9H5I5 2752 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 PMS2P1A4D2B8 440 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 NKX2-6A6NCS4 301 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 SPRY3O43610 288 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 IL2RAP01589 272 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 FCGR3AP08637 254 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 NDUFB7P17568 137 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 ID4P47928 161 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 NOVA1P51513 510 aaKnown RBP9.58□□□□□ -0.88
COL27A1-204ENST00000477421 NHLH2Q02577 135 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF239Q16600 458 aaKnown RBP9.58□□□□□ -0.88
COL27A1-204ENST00000477421 MRPL14Q6P1L8 145 aaKnown RBP9.58□□□□□ -0.88
COL27A1-204ENST00000477421 H2BFWTQ7Z2G1 175 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 ANAPC16Q96DE5 110 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 RASL12Q9NYN1 266 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 TANC1Q9C0D5 1861 aa9.58□□□□□ -0.88
COL27A1-204ENST00000477421 HIST2H3PS2Q5TEC6 136 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 TMEM65Q6PI78 240 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 STPG2Q8N412 459 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 H1FXQ92522 213 aaKnown RBP9.57□□□□□ -0.88
COL27A1-204ENST00000477421 SIGLEC12Q96PQ1 595 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 OR2J1Q9GZK6 312 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 PRSS50Q9UI38 385 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 IGLV3-12A0A075B6K2 115 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 PIGBOS1A0A0B4J2F0 54 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 IGKV1-9A0A0C4DH69 117 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 TMEM218A2RU14 115 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 C3orf80F5H4A9 247 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms