RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 IQCJQ1A5X6 159 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 LANCL3Q6ZV70 420 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 NOXO1Q8NFA2 376 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 OR4X1Q8NH49 305 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 TOMM40LQ969M1 308 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 C10orf35Q96D05 121 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 MMABQ96EY8 250 aaPredicted RBP13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 GAL3ST4Q96RP7 486 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 PNO1Q9NRX1 252 aaKnown RBP13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 MARCH11A6NNE9 402 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 DUX1O43812 170 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 NKX2-1P43699 371 aaPredicted RBP13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 SP6Q3SY56 376 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 C5orf24Q7Z6I8 188 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 CMTM1Q8IZ96 169 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF321PQ8N8H1 164 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 Q96M66 194 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 PYGO2Q9BRQ0 406 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 VN1R1Q9GZP7 353 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 SOHLH2Q9NX45 425 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 P4HTMQ9NXG6 502 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 CABIN1Q9Y6J0 2220 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 PCNX3Q9H6A9 2034 aa13.26□□□□□ -0.29
CLSTN1-205ENST00000477264 DUXBA0A1W2PPF3 345 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF850A8MQ14 1090 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 MBP02144 154 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 SP9P0CG40 484 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 OR1D5P58170 312 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 VAMP2P63027 116 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 FOXF1Q12946 379 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 GAGE1Q13065 139 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 ACSF3Q4G176 576 aaPredicted RBP13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF721Q8TF20 911 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 TSLPQ969D9 159 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 ABHD14AQ9BUJ0 271 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 SDF2L1Q9HCN8 221 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 FSCN3Q9NQT6 498 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 ALKBH4Q9NXW9 302 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 SLC7A11Q9UPY5 501 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 IGHV1OR21-1A0A087WYE8 117 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 FAM24AA6NFZ4 105 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 STMND1H3BQB6 276 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 IGLV3-1P01715 115 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 BCL2P10415 239 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 IL11P20809 199 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 EPHA1P21709 976 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 GABREP78334 506 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 C4orf17Q53FE4 359 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 PLXDC1Q8IUK5 500 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 GPR137CQ8N3F9 429 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 TMEM252Q8N6L7 170 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF283Q8N7M2 679 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 SAP25Q8TEE9 199 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 TMEM18Q96B42 140 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 MOB3AQ96BX8 217 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 MED29Q9NX70 200 aa13.25□□□□□ -0.29
CLSTN1-205ENST00000477264 TRDCB7Z8K6 153 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 CER1O95813 267 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 DDAH2O95865 285 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 IL18BPO95998 194 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 DBHP09172 617 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 GFERP55789 205 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 SUMO3P55854 103 aaPredicted RBP13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 BIDP55957 195 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 TAS2R30P59541 319 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 KCNMB1Q16558 191 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 TRIM61Q5EBN2 209 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 C1orf189Q5VU69 101 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 CRIP3Q6Q6R5 217 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 C6orf201Q7Z4U5 140 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 D2HGDHQ8N465 521 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 DDIT4LQ96D03 193 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 MRPL13Q9BYD1 178 aaKnown RBP13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 RNF150Q9ULK6 438 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 ETV2O00321 342 aaPredicted RBP13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 PHF1O43189 567 aaPredicted RBP13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 RAB11AP62491 216 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 IL24Q13007 206 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 LPAL2Q16609 132 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 SLC35G3Q8N808 338 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 ADPRHL1Q8NDY3 354 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 OR5L1Q8NGL2 311 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 TMEM171Q8WVE6 324 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 POM121Q96HA1 1249 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 CYYR1Q96J86 154 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 ATP5SQ99766 215 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 SNHG12Q9BXW3 62 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 LANCL2Q9NS86 450 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 VDAC3Q9Y277 283 aa13.24□□□□□ -0.29
CLSTN1-205ENST00000477264 A0A0U1RQV5 110 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 ANKUB1A6NFN9 424 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF705GA8MUZ8 300 aaPredicted RBP13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 PATE3B3GLJ2 98 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 WISP1O95388 367 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 LINC00614P0C842 121 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 PGA3P0DJD8 388 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 MYF5P13349 255 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 CTSSP25774 331 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 ARL4DP49703 201 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 CLRN1P58418 232 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms