RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TNRC6AQ8NDV7 1962 aaKnown RBP14.13□□□□□ -0.15
TMEM53-208ENST00000476724 FAM221AA4D161 298 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 ATF4P18848 351 aaPredicted RBP14.13□□□□□ -0.15
TMEM53-208ENST00000476724 NPBWR2P48146 333 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 TNFSF10P50591 281 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 RAB1AP62820 205 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 MPV17LQ2QL34 196 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 MCEMP1Q8IX19 187 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 OR5A2Q8NGI9 324 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 NKX6-2Q9C056 277 aaPredicted RBP14.13□□□□□ -0.15
TMEM53-208ENST00000476724 BLOC1S1P78537 153 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 SRPXP78539 464 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 PMP22Q01453 160 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 PJVKQ0ZLH3 352 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 C9orf135Q5VTT2 229 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 RPL7L1Q6DKI1 246 aaKnown RBP14.13□□□□□ -0.15
TMEM53-208ENST00000476724 ATRAIDQ6UW56 229 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 SVBPQ8N300 66 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 EXTL1Q92935 676 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 MSI2Q96DH6 328 aaKnown RBP14.13□□□□□ -0.15
TMEM53-208ENST00000476724 POM121L2Q96KW2 1035 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 HIST1H2AAQ96QV6 131 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 ZNF629Q9UEG4 869 aaPredicted RBP14.13□□□□□ -0.15
TMEM53-208ENST00000476724 TMED3Q9Y3Q3 217 aa14.13□□□□□ -0.15
TMEM53-208ENST00000476724 LSM5Q9Y4Y9 91 aaKnown RBP14.13□□□□□ -0.15
TMEM53-208ENST00000476724 PPYP01298 95 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 DUSP1P28562 367 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 HAAOP46952 286 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 SULT1A2P50226 295 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 DAZAP2Q15038 168 aaPredicted RBP14.12□□□□□ -0.15
TMEM53-208ENST00000476724 C3AR1Q16581 482 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 SP6Q3SY56 376 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 BOLLQ8N9W6 283 aaKnown RBP14.12□□□□□ -0.15
TMEM53-208ENST00000476724 GLYATL2Q8WU03 294 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 DEFB127Q9H1M4 99 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 PLK3Q9H4B4 646 aa14.12□□□□□ -0.15
TMEM53-208ENST00000476724 ZNF891A8MT65 544 aaPredicted RBP14.11□□□□□ -0.15
TMEM53-208ENST00000476724 BCL3P20749 454 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 TMEM33P57088 247 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 SLC10A1Q14973 349 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 MST1LQ2TV78 715 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 PHLDA2Q53GA4 152 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 SMUG1Q53HV7 270 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 C10orf91Q5T1B1 145 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 GPR157Q5UAW9 335 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 TMEM268Q5VZI3 342 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 OR2A2Q6IF42 318 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 LINC00596Q86U02 117 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 HPSE2Q8WWQ2 592 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 TSNAXQ99598 290 aaKnown RBP14.11□□□□□ -0.15
TMEM53-208ENST00000476724 RCC2Q9P258 522 aaKnown RBP14.11□□□□□ -0.15
TMEM53-208ENST00000476724 AMDHD2Q9Y303 409 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 SPTBN2O15020 2390 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 TRAPPC2LH3BP13 241 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 DNASE2O00115 360 aaPredicted RBP14.11□□□□□ -0.15
TMEM53-208ENST00000476724 DIRAS3O95661 229 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 MBPP02686 304 aaPredicted RBP14.11□□□□□ -0.15
TMEM53-208ENST00000476724 AADACP22760 399 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 GPM6AP51674 278 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 FOXG1P55316 489 aaPredicted RBP14.11□□□□□ -0.15
TMEM53-208ENST00000476724 IL13RA2Q14627 380 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 PDCD1Q15116 288 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 TMEM178AQ8NBL3 297 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 UBAC2Q8NBM4 344 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 OR5T2Q8NGG2 359 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 SLAMF9Q96A28 289 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 Q9N2K0 584 aa14.11□□□□□ -0.15
TMEM53-208ENST00000476724 ZNF732B4DXR9 585 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 ABCD4O14678 606 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 SCGB1D2O95969 90 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 NAPSAO96009 420 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 CTXN2P0C2S0 81 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 FOXC1Q12948 553 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 FREM1Q5H8C1 2179 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 IGFL2Q6UWQ7 119 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 Q6ZPA2 131 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 LYZL2Q7Z4W2 148 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 OR5L1Q8NGL2 311 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 GTF3AQ92664 365 aaKnown RBP14.1□□□□□ -0.15
TMEM53-208ENST00000476724 RIMS4Q9H426 269 aaPredicted RBP14.1□□□□□ -0.15
TMEM53-208ENST00000476724 SPACA1Q9HBV2 294 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 FBXL17Q9UF56 701 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 CARHSP1Q9Y2V2 147 aaKnown RBP14.1□□□□□ -0.15
TMEM53-208ENST00000476724 MPC1Q9Y5U8 109 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 FRYQ5TBA9 3013 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 KIR2DS1A0A191URI9 304 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 MPPED1O15442 326 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 ZNF205O95201 554 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 TK1P04183 234 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 CCL2P13500 99 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 KIR2DS4P43632 304 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 P2RY1P47900 373 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 RND3P61587 244 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 KIR2DS1Q14954 304 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 FAM219AQ8IW50 185 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 SPAG16Q8N0X2 631 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 FGF23Q9GZV9 251 aaPredicted RBP14.1□□□□□ -0.15
TMEM53-208ENST00000476724 GP6Q9HCN6 339 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 PARP11Q9NR21 331 aa14.1□□□□□ -0.15
TMEM53-208ENST00000476724 C3orf85A0A1B0GTC6 90 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms