RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CLEC20AQ6ZU45 233 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 LINC00304Q8N9R0 145 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 BBOF1Q8ND07 529 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 OR1L1Q8NH94 360 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 ENKURQ8TC29 256 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 DCAKDQ8WVC6 231 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 SMARCD1Q96GM5 515 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 TEAD3Q99594 435 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 ZC4H2Q9NQZ6 224 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 CISHQ9NSE2 258 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 DHCR7Q9UBM7 475 aaKnown RBP2.51□□□□□ -2.01
PTCD3-211ENST00000476215 HMGXB4Q9UGU5 601 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 COQ4Q9Y3A0 265 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 ATP6V1DQ9Y5K8 247 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 PKD1L2Q7Z442 2459 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 KALRNO60229 2985 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 MYOFQ9NZM1 2061 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 KNTC1P50748 2209 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 SPAG17Q6Q759 2223 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 PATJQ8NI35 1801 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 GOLGA6L4A6NEF3 574 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 M0R1X1 148 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 MANBAO00462 879 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 SMC2O95347 1197 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 IGKV4-1P06312 121 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 CSRP1P21291 193 aaKnown RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 PRKACBP22694 351 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 APLNRP35414 380 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 GPR1P46091 355 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 CMC4P56277 68 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 RBX1P62877 108 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 KDSRQ06136 332 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 IGFBP7Q16270 282 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 ZCWPW2Q504Y3 356 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 TPGS1Q6ZTW0 290 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 RAB43Q86YS6 212 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 ARHGAP18Q8N392 663 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 DRAM1Q8N682 238 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 DEFB119Q8N690 84 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 LRRC75AQ8NAA5 344 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 INO80EQ8NBZ0 244 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 OR5M1Q8NGP8 315 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 OR1P1Q8NH06 330 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 UBA3Q8TBC4 463 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 ASZ1Q8WWH4 475 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 TMA16Q96EY4 203 aaKnown RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 ZFP3Q96NJ6 502 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 GPR82Q96P67 336 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 SCGB3A2Q96PL1 93 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 GABRG3Q99928 467 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 BBS2Q9BXC9 721 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 IQCGQ9H095 443 aaKnown RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 DHX35Q9H5Z1 703 aaKnown RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 RMND1Q9NWS8 449 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 FASNP49327 2511 aaKnown RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 CFAP46Q8IYW2 2715 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 ASCC3Q8N3C0 2202 aaKnown RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 ASXL3Q9C0F0 2248 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 ZNF638Q14966 1978 aaKnown RBP2.5□□□□□ -2.01
PTCD3-211ENST00000476215 COL4A2P08572 1712 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 FAM208BQ5VWN6 2430 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 DENND4CQ5VZ89 1909 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 ANAPC1Q9H1A4 1944 aa2.5□□□□□ -2.01
PTCD3-211ENST00000476215 GCN1Q92616 2671 aaKnown RBP2.49□□□□□ -2.01
PTCD3-211ENST00000476215 BPTFQ12830 3046 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 TCHHQ07283 1943 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 GREB1Q4ZG55 1949 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 GOLGA6L7A0A1B0GV03 622 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 SIVA1O15304 175 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 MPDU1O75352 247 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 LHBP01229 141 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 PAEPP09466 180 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 PI4KAP42356 2102 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 MAGEA1P43355 309 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 YWHAEP62258 255 aaKnown RBP2.49□□□□□ -2.01
PTCD3-211ENST00000476215 DNAJC3Q13217 504 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 GOLGA7BQ2TAP0 167 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 TMEM215Q68D42 235 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 OR2T5Q6IEZ7 315 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 MED27Q6P2C8 311 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 PRSS54Q6PEW0 395 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 DEGS2Q6QHC5 323 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 FAM122BQ7Z309 247 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 TMEM104Q8NE00 496 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 DEFB124Q8NES8 71 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 OR2Z1Q8NG97 314 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 OR52K2Q8NGK3 314 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 OR2T29Q8NH02 315 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 KLF14Q8TD94 323 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-211ENST00000476215 DDI1Q8WTU0 396 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 RCN3Q96D15 328 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 EMC6Q9BV81 110 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 ULBP1Q9BZM6 244 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 CLSTN2Q9H4D0 955 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 RBFOX1Q9NWB1 397 aaKnown RBP2.49□□□□□ -2.01
PTCD3-211ENST00000476215 TAS2R5Q9NYW4 299 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 STOML2Q9UJZ1 356 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 NUP210Q8TEM1 1887 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms