RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 PIGPP57054 158 aa13.09□□□□□ -0.31
RPUSD3-215ENST00000475470 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPUSD3-215ENST00000475470 Q6ZS49 121 aa13.09□□□□□ -0.31
RPUSD3-215ENST00000475470 OR5T2Q8NGG2 359 aa13.09□□□□□ -0.31
RPUSD3-215ENST00000475470 RDH5Q92781 318 aa13.09□□□□□ -0.31
RPUSD3-215ENST00000475470 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
RPUSD3-215ENST00000475470 TMEM100Q9NV29 134 aa13.09□□□□□ -0.31
RPUSD3-215ENST00000475470 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
RPUSD3-215ENST00000475470 SPENQ96T58 3664 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 IGHV1-18A0A0C4DH31 117 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 C3orf80F5H4A9 247 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 TUBG1P23258 451 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 PSMB6P28072 239 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 HERV-K104P61576 105 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 ATXN7L3Q14CW9 347 aaPredicted RBP13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 IGSF11Q5DX21 431 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 Q8IYB0 196 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 FAM57AQ8TBR7 257 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 TUBG2Q9NRH3 451 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 C1orf123Q9NWV4 160 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 PURGQ9UJV8 347 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 TNFSF18Q9UNG2 199 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 TP53TG5Q9Y2B4 290 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 A0A0D9SG52 128 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 H0YL77 283 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 DEGS1O15121 323 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 GRPP07492 148 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF44P15621 663 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 RAB14P61106 215 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF154Q13106 437 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 RBM39Q14498 530 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 ESCO2Q56NI9 601 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 OR8G5Q8NG78 346 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 MOB3AQ96BX8 217 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 PIK3IP1Q96FE7 263 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 RIMS4Q9H426 269 aaPredicted RBP13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 TINAGQ9UJW2 476 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 SLC25A15Q9Y619 301 aa13.08□□□□□ -0.32
RPUSD3-215ENST00000475470 TRAV24A0A0B4J272 114 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 IGHV3-64DA0A0J9YX35 117 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 CDIPTO14735 213 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 SLC34A2O95436 690 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 CRYZL1O95825 349 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 HOXB5P09067 269 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 AADACP22760 399 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF718Q3SXZ3 478 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF474Q6S9Z5 364 aaPredicted RBP13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 WASF3Q9UPY6 502 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 KCNIP3Q9Y2W7 256 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 IGHV2OR16-5A0A0B4J2B6 119 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 KIR2DS1A0A191URI9 304 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 TMEM210A6NLX4 147 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 TIMM8AO60220 97 aaPredicted RBP13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 GLAP06280 429 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 GCH1P30793 250 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 KIR2DS4P43632 304 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 FABP6P51161 128 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 KIR2DS1Q14954 304 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 ALKBH2Q6NS38 261 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 SLC38A6Q8IZM9 456 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 RTN4IP1Q8WWV3 396 aaPredicted RBP13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 GTF3AQ92664 365 aaKnown RBP13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 MBD2Q9UBB5 411 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 FZR1Q9UM11 496 aa13.07□□□□□ -0.32
RPUSD3-215ENST00000475470 MPTX1A8MV57 137 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 TRDCB7Z8K6 153 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 OR2F2O95006 317 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 TK1P04183 234 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 SCTP09683 121 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 UCP3P55916 312 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 OR2F1Q13607 317 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 PHLDA2Q53GA4 152 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 FAM169BQ8N8A8 192 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 C2orf50Q96LR7 162 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 IFT22Q9H7X7 185 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 LAMA5O15230 3695 aa13.06□□□□□ -0.32
RPUSD3-215ENST00000475470 BET1O15155 118 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 NXPH2O95156 264 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 DIRAS3O95661 229 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 PPYP01298 95 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 HOXD4P09016 255 aaPredicted RBP13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 ERVK11-1P61568 191 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF345Q14585 488 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 ACOT7LQ6ZUV0 252 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 CCDC28AQ8IWP9 274 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 KCNRGQ8N5I3 272 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 INO80EQ8NBZ0 244 aaPredicted RBP13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 ANGPTL6Q8NI99 470 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 S100PBPQ96BU1 408 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 OR10C1Q96KK4 312 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 VRK1Q99986 396 aaPredicted RBP13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 SYT3Q9BQG1 590 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 NRIP2Q9BQI9 281 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 SFXN3Q9BWM7 321 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 GSX2Q9BZM3 304 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 NAA60Q9H7X0 242 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 ATP23Q9Y6H3 246 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 MGAQ8IWI9 3026 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms