RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 C11orf91Q3C1V1 193 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 Q8IYB0 196 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 PARP16Q8N5Y8 322 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 RPS4Y2Q8TD47 263 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
ATG9A-220ENST00000475339 RGP1Q92546 391 aaPredicted RBP11.36□□□□□ -0.59
ATG9A-220ENST00000475339 GHSRQ92847 366 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 EMG1Q92979 244 aaKnown RBP11.36□□□□□ -0.59
ATG9A-220ENST00000475339 TMEM106AQ96A25 262 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 RFT1Q96AA3 541 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 RBMXL1Q96E39 390 aaKnown RBP11.36□□□□□ -0.59
ATG9A-220ENST00000475339 SSX3Q99909 188 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 CCDC90BQ9GZT6 254 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 SIRT7Q9NRC8 400 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 BLOC1S6Q9UL45 172 aa11.36□□□□□ -0.59
ATG9A-220ENST00000475339 IGKV1D-17A0A075B6S4 117 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 MEIOCA2RUB1 952 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 RGS10O43665 173 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 ANGPTL7O43827 346 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 LALBAP00709 142 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 MT-ND2P03891 347 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 ACAA1P09110 424 aaPredicted RBP11.35□□□□□ -0.59
ATG9A-220ENST00000475339 SELLP14151 372 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 PRDX2P32119 198 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 SAA4P35542 130 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 YIF1BQ5BJH7 314 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 DMKNQ6E0U4 476 aaPredicted RBP11.35□□□□□ -0.59
ATG9A-220ENST00000475339 ZFAND6Q6FIF0 208 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 CRIP3Q6Q6R5 217 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 NANOGP1Q8N7R0 232 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 OR5D18Q8NGL1 313 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 SPACA5Q96QH8 159 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 GPER1Q99527 375 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 NPFFR1Q9GZQ6 430 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 TAS2R4Q9NYW5 299 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 ONECUT1Q9UBC0 465 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 CKLFQ9UBR5 152 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 ZNF222Q9UK12 451 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 KPTNQ9Y664 436 aa11.35□□□□□ -0.59
ATG9A-220ENST00000475339 SIRT4Q9Y6E7 314 aaPredicted RBP11.35□□□□□ -0.59
ATG9A-220ENST00000475339 STARD9Q9P2P6 4700 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 A0A1W2PQ09 198 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 CHST1O43916 411 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 FCN3O75636 299 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 CHRM2P08172 466 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 CELP19835 753 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 AMY2BP19961 511 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 ERVK11-1P61568 191 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 PDZK1IP1Q13113 114 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 KLRD1Q13241 179 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 RNLSQ5VYX0 342 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
ATG9A-220ENST00000475339 SATL1Q86VE3 508 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 CMTM4Q8IZR5 234 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 ZNF561Q8N587 486 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 ASCC1Q8N9N2 400 aaKnown RBP11.34□□□□□ -0.59
ATG9A-220ENST00000475339 ZNF485Q8NCK3 441 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 ZNRF1Q8ND25 227 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 OR13C5Q8NGS8 318 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 DPF1Q92782 380 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 SDSLQ96GA7 329 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 OR5M11Q96RB7 305 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 ZNF184Q99676 751 aaPredicted RBP11.34□□□□□ -0.59
ATG9A-220ENST00000475339 NKX3-1Q99801 234 aaPredicted RBP11.34□□□□□ -0.59
ATG9A-220ENST00000475339 CDCA4Q9BXL8 241 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 FAM192AQ9GZU8 254 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 ZNF702PQ9H963 129 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 HES4Q9HCC6 221 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 MTCH1Q9NZJ7 389 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 GLS2Q9UI32 602 aa11.34□□□□□ -0.59
ATG9A-220ENST00000475339 TMEM225BP0DP42 221 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 BCL3P20749 454 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 CEBPDP49716 269 aaPredicted RBP11.33□□□□□ -0.6
ATG9A-220ENST00000475339 CAV3P56539 151 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 BDH1Q02338 343 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 GUCA2AQ02747 115 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 SPHARQ15513 63 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 MED22Q15528 200 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 KISS1Q15726 138 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 Q499Y3 187 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 FAM58AQ8N1B3 248 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 CD177Q8N6Q3 437 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 BEND2Q8NDZ0 799 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 Q8NFD4 153 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 C17orf50Q8WW18 174 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 PGLYRP3Q96LB9 341 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 DCTN5Q9BTE1 182 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 ELL3Q9HB65 397 aaPredicted RBP11.33□□□□□ -0.6
ATG9A-220ENST00000475339 RAB18Q9NP72 206 aa11.33□□□□□ -0.6
ATG9A-220ENST00000475339 RBFOX1Q9NWB1 397 aaKnown RBP11.33□□□□□ -0.6
ATG9A-220ENST00000475339 PAK1IP1Q9NWT1 392 aaPredicted RBP11.33□□□□□ -0.6
ATG9A-220ENST00000475339 TRBV23-1A0A0A0MS06 115 aa11.32□□□□□ -0.6
ATG9A-220ENST00000475339 TRBV5-5A0A0J9YX44 114 aa11.32□□□□□ -0.6
ATG9A-220ENST00000475339 RBMY1BA6NDE4 496 aaKnown RBP11.32□□□□□ -0.6
ATG9A-220ENST00000475339 RBMY1EA6NEQ0 496 aaKnown RBP11.32□□□□□ -0.6
ATG9A-220ENST00000475339 F8VVB4 439 aa11.32□□□□□ -0.6
ATG9A-220ENST00000475339 F8VWA3 439 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms