RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 BDH1Q02338 343 aa16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 SCN1BQ07699 218 aa16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 AESQ08117 197 aa16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 HABP2Q14520 560 aaPredicted RBP16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 KISS1Q15726 138 aa16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 KLHL22Q53GT1 634 aa16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 PRAMEF5Q5TYX0 476 aa16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 C1QL4Q86Z23 238 aa16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 AKR1E2Q96JD6 320 aa16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 ISG20L2Q9H9L3 353 aaKnown RBP16.37■□□□□ 0.21
PDLIM4-206ENST00000474421 LOC100130705A0A1B0GUX0 176 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 DEGS1O15121 323 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 MAGEB3O15480 346 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 MMP23AO75900 390 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 PTGFRP43088 359 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 GLIPR1P48060 266 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 MTNR1BP49286 362 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 KRBOX4Q5JUW0 171 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 Q6P435 159 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 NDUFA11Q86Y39 141 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 OR4D6Q8NGJ1 314 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 TSEN15Q8WW01 171 aaKnown RBP16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 CAPSLQ8WWF8 208 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 AMBNQ9NP70 447 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 MRPS18AQ9NVS2 196 aaKnown RBP16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 OR6C3Q9NZP0 311 aa16.36■□□□□ 0.21
PDLIM4-206ENST00000474421 LEUTXA8MZ59 168 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 SLC33A1O00400 549 aaPredicted RBP16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 TOR1AO14656 332 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 CD34P28906 385 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 CEACAM3P40198 252 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 VDAC2P45880 294 aaPredicted RBP16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 ZP1P60852 638 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 ZNF691Q5VV52 312 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 RNF144BQ7Z419 303 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 PDCD1LG2Q9BQ51 273 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 WNT10AQ9GZT5 417 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 S100A14Q9HCY8 104 aa16.35■□□□□ 0.21
PDLIM4-206ENST00000474421 ZNF729A6NN14 1252 aaPredicted RBP16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 IGLV1-47P01700 117 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 CD28P10747 220 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 RAB3AP20336 220 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 PRRX1P54821 245 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 BLCAPP62952 87 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 NSUN5P1Q3KNT7 163 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 ELP2Q6IA86 826 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 PQLC1Q8N2U9 271 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 PXT1Q8NFP0 134 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 OR4F17Q8NGA8 305 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 OR52I1Q8NGK6 324 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 WIPF2Q8TF74 440 aaPredicted RBP16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 STMN2Q93045 179 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 OR4F4Q96R69 305 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 SLC29A1Q99808 456 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 ZNF649Q9BS31 505 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 LIN7BQ9HAP6 207 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 FAM118AQ9NWS6 357 aa16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.34■□□□□ 0.21
PDLIM4-206ENST00000474421 E9PI62 339 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 XPNPEP2O43895 674 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 JUNBP17275 347 aaPredicted RBP16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 CDK5R1Q15078 307 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 LPCAT4Q643R3 524 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 CCDC144NLQ6NUI1 221 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 ZNF565Q8N9K5 539 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 COQ2Q96H96 371 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 GPER1Q99527 375 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 NCOR1P1Q9H4R4 102 aa16.33■□□□□ 0.2
PDLIM4-206ENST00000474421 A0A087X0M5 115 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 A0A1B0GX30 115 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 OOSP1A8MZH6 123 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 CD2P06729 351 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 ATXN7L3Q14CW9 347 aaPredicted RBP16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 BEAN1Q3B7T3 259 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 CCDC58Q4VC31 144 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 SAMD5Q5TGI4 173 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 HIST2H2BDQ6DRA6 164 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 ZNF529Q6P280 563 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 BAIAP2L2Q6UXY1 529 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 ZNF555Q8NEP9 628 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 OR51T1Q8NGJ9 327 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 GPR148Q8TDV2 347 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 RDH12Q96NR8 316 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 OR5M11Q96RB7 305 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 JAM3Q9BX67 310 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 ING3Q9NXR8 418 aa16.32■□□□□ 0.2
PDLIM4-206ENST00000474421 NOTCH3Q9UM47 2321 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 KBTBD11-OT1A0A1B0GTJ5 212 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 G3V4G9 280 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 H0YJX3 145 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 BUB1B-PAK6H3BSN5 160 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 MNDAP41218 407 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 KCNJ3P48549 501 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 IL13RA2Q14627 380 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 HLA-DRB5Q30154 266 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 PAN3Q58A45 887 aaKnown RBP16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 KPRPQ5T749 579 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 RPL22L1Q6P5R6 122 aaKnown RBP16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 TMPRSS11AQ6ZMR5 421 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 SATL1Q86VE3 508 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms