RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 GLIPR1P48060 266 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 MTNR1BP49286 362 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 DOC2BQ14184 412 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 ATXN7L3Q14CW9 347 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-203ENST00000474056 AANATQ16613 207 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 ELP2Q6IA86 826 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 AHSA2Q719I0 299 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 OR10K1Q8NGX5 313 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 PIFOQ8TCI5 191 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 GHSRQ92847 366 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 CPNE2Q96FN4 548 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-203ENST00000474056 COQ2Q96H96 371 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 NR1H4Q96RI1 486 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-203ENST00000474056 CITED1Q99966 193 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 C16orf95Q9H693 158 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 DCLRE1BQ9H816 532 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 ING3Q9NXR8 418 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 CNOT2Q9NZN8 540 aaKnown RBP14.52□□□□□ -0.09
UPF3A-203ENST00000474056 UBE2J1Q9Y385 318 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-203ENST00000474056 IGHV2-26A0A0B4J1V2 119 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 TRBV5-5A0A0J9YX44 114 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 PNMA8CA0A1B0GUJ8 204 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 EFCAB10A6NFE3 127 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 H0YJX3 145 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 DEGS1O15121 323 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 CSN2P05814 226 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 C21orf33P30042 268 aaPredicted RBP14.51□□□□□ -0.09
UPF3A-203ENST00000474056 OR3A4PP47883 348 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 RPS11P62280 158 aaKnown RBP eCLIP14.51□□□□□ -0.09
UPF3A-203ENST00000474056 DYNC1I2Q13409 638 aaKnown RBP14.51□□□□□ -0.09
UPF3A-203ENST00000474056 DDI2Q5TDH0 399 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 PRAMEF5Q5TYX0 476 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 BAIAP2L2Q6UXY1 529 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 STX19Q8N4C7 294 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 CHST4Q8NCG5 386 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 BPIFB6Q8NFQ5 453 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 TMEM133Q9H2Q1 129 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 PLCXD1Q9NUJ7 323 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 PSORS1C1Q9UIG5 152 aa14.51□□□□□ -0.09
UPF3A-203ENST00000474056 TET2Q6N021 2002 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-203ENST00000474056 TRGV10A0A0A0MS01 117 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 FUOMA2VDF0 154 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 MEGF11A6BM72 1044 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 HSPB6O14558 160 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 ALDOBP05062 364 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 IGFBP3P17936 291 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-203ENST00000474056 GDNFP39905 211 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 PPP3R1P63098 170 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 FAM189A2Q15884 450 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 SSX2Q16385 188 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 KRBOX4Q5JUW0 171 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 SLC35E4Q6ICL7 350 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 ASCL4Q6XD76 172 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 OR51T1Q8NGJ9 327 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 TFAP2CQ92754 450 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 CORO2AQ92828 525 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 FOXRED1Q96CU9 486 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-203ENST00000474056 PPIL3Q9H2H8 161 aaKnown RBP14.5□□□□□ -0.09
UPF3A-203ENST00000474056 VCXQ9H320 206 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 TMEM138Q9NPI0 162 aa14.5□□□□□ -0.09
UPF3A-203ENST00000474056 TRAV24A0A0B4J272 114 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 ODAMA1E959 279 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 MAGEA13PA6NCF6 341 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 VGLL3A8MV65 326 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 CHST1O43916 411 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 CDRT1O95170 752 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 HTR3BO95264 441 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 JUNBP17275 347 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-203ENST00000474056 BDKRB2P30411 391 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 ZNF93P35789 620 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-203ENST00000474056 RAB13P51153 203 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 IL13RA2Q14627 380 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 RSU1Q15404 277 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 PIGYQ3MUY2 71 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 Q499Y3 187 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 YIF1BQ5BJH7 314 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 Q8NFD4 153 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 MALSU1Q96EH3 234 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 CLEC7AQ9BXN2 247 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 GAL3ST2Q9H3Q3 398 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 FKBP14Q9NWM8 211 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 TAS2R3Q9NYW6 316 aa14.49□□□□□ -0.09
UPF3A-203ENST00000474056 FAM172BPA6NC97 362 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 MYL12BO14950 172 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 CDK2P24941 298 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 PTGFRP43088 359 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 AQP4P55087 323 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 WNT4P56705 351 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 TAS2R43P59537 309 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 SLC34A1Q06495 639 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 RIPK1Q13546 671 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 PAN3Q58A45 887 aaKnown RBP14.48□□□□□ -0.09
UPF3A-203ENST00000474056 HEPN1Q6WQI6 88 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 OR4P4Q8NGL7 312 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 NRG4Q8WWG1 115 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 OR14A2Q96R54 314 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 ZNF184Q99676 751 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-203ENST00000474056 ZNF581Q9P0T4 197 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 ING4Q9UNL4 249 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 SIGLEC9Q9Y336 463 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms