RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 H3BUI4 141 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 BET1O15155 118 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 CA11O75493 328 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 FCGR2CP31995 323 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 SUPT4H1P63272 117 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 ATXN7L3Q14CW9 347 aaPredicted RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 EIF2S3LQ2VIR3 472 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 ACTBL2Q562R1 376 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 FAM76BQ5HYJ3 339 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 ZNF660Q6AZW8 331 aaPredicted RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 PKIBQ9C010 78 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 ALX4Q9H161 411 aaPredicted RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 RCC2Q9P258 522 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 FLNCQ14315 2725 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 MPTX1A8MV57 137 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 MCRIP1C9JLW8 97 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 DEGS1O15121 323 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 SPRY3O43610 288 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 ATP6V1G1O75348 118 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 ADAP1O75689 374 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 OR2H2O95918 312 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 THBDP07204 575 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 PGA5P0DJD9 388 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 KITLGP21583 273 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 DTYMKP23919 212 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 SEC61A1P61619 476 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 LGALSLQ3ZCW2 172 aaPredicted RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 PHLDA2Q53GA4 152 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 Q6P435 159 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 UNQ6494/PRO21346Q6UXR6 183 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 PRR18Q8N4B5 295 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 OR11L1Q8NGX0 322 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 PLPPR1Q8TBJ4 325 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 TMEM171Q8WVE6 324 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 HYLS1Q96M11 299 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 NRIP2Q9BQI9 281 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 DPCDQ9BVM2 203 aaPredicted RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 ZNF286AQ9HBT8 521 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 OPN4Q9UHM6 478 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 METRNQ9UJH8 293 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 FAM90A27PA6NNH2 459 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 C16orf97H3BN30 126 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 KCNAB3O43448 404 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 HOXD4P09016 255 aaPredicted RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 EGR1P18146 543 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 FPR2P25090 351 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 CD40P25942 277 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 GRNP28799 593 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 ERVK11-1P61568 191 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 NKX6-1P78426 367 aaPredicted RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 SORDQ00796 357 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 HERPUD1Q15011 391 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 ZMYND11Q15326 602 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 CDSNQ15517 529 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 ANKRD55Q3KP44 614 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 SP6Q3SY56 376 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 PAN3Q58A45 887 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 NHLRC3Q5JS37 347 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 CLEC18BQ6UXF7 455 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 WDR82Q6UXN9 313 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 MRGPRGQ86SM5 289 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 PEG10Q86TG7 708 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 SLC7A5P1Q8MH63 180 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 ZCCHC24Q8N2G6 241 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 MRPL30Q8TCC3 161 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 MRPL37Q9BZE1 423 aaKnown RBP5.27□□□□□ -1.57
CLK1-210ENST00000473565 FXYD6Q9H0Q3 95 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 NECAP2Q9NVZ3 263 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 C1orf123Q9NWV4 160 aa5.27□□□□□ -1.57
CLK1-210ENST00000473565 FXYD6-FXYD2A0A087WZ82 144 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 IGKV1-6A0A0C4DH72 117 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 C13orf42A0A1B0GVH6 325 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 DPRXA6NFQ7 191 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 ABCD4O14678 606 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 OR2A4O95047 310 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 NAPSAO96009 420 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 GIPP09681 153 aaPredicted RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 AADACP22760 399 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 ZNF81P51508 661 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 MPV17LQ2QL34 196 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 FAM201AQ5SY85 155 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 MBNL2Q5VZF2 373 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 TMEM211Q6ICI0 200 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 FAM53AQ6NSI3 398 aaPredicted RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 ADAM5Q6NVV9 412 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 TGIF2LYQ8IUE0 185 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 TPRX1Q8N7U7 411 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 OR2A7Q96R45 310 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 USB1Q9BQ65 265 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 CXXC4Q9H2H0 198 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 RANBP3Q9H6Z4 567 aaPredicted RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 Q9N2K0 584 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 RALYQ9UKM9 306 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 PAIP2BQ9ULR5 123 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 ASH1LQ9NR48 2969 aaKnown RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 USP24Q9UPU5 2620 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 IGHV3OR15-7A0A075B7D8 119 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 MED19A0JLT2 244 aaPredicted RBP5.26□□□□□ -1.57
CLK1-210ENST00000473565 NKX2-6A6NCS4 301 aa5.26□□□□□ -1.57
CLK1-210ENST00000473565 SLC33A1O00400 549 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms