RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 HLA-DMAP28067 261 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 OR3A3P47888 321 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 SNTB1Q13884 538 aaKnown RBP10.82□□□□□ -0.68
VPS13D-205ENST00000473099 DAZAP2Q15038 168 aaPredicted RBP10.82□□□□□ -0.68
VPS13D-205ENST00000473099 CHRFAM7AQ494W8 412 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 SFRP4Q6FHJ7 346 aaPredicted RBP10.82□□□□□ -0.68
VPS13D-205ENST00000473099 Q6P435 159 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 MOB1BQ7L9L4 216 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 MOGAT3Q86VF5 341 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 C1orf87Q8N0U7 546 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 BATF2Q8N1L9 274 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 BPIFB2Q8N4F0 458 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 SUMF2Q8NBJ7 301 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 OR5AP2Q8NGF4 316 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 SNAPC3Q92966 411 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 DPCDQ9BVM2 203 aaPredicted RBP10.82□□□□□ -0.68
VPS13D-205ENST00000473099 MMP28Q9H239 520 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 DECR2Q9NUI1 292 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 NUDT15Q9NV35 164 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 ETAA1Q9NY74 926 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 IL36RNQ9UBH0 155 aa10.82□□□□□ -0.68
VPS13D-205ENST00000473099 MAST4O15021 2626 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 TRAV24A0A0B4J272 114 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 KIR2DS1A0A191URI9 304 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 OR2H2O95918 312 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 NAPSAO96009 420 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 LHBP01229 141 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 IGFBP2P18065 325 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 DUSP1P28562 367 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 HRH1P35367 487 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 ECI1P42126 302 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 KIR2DS4P43632 304 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 PPOXP50336 477 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 CCR6P51684 374 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 ARPC4P59998 168 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 KIR2DS1Q14954 304 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 GRK1Q15835 563 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 PAN3Q58A45 887 aaKnown RBP10.81□□□□□ -0.68
VPS13D-205ENST00000473099 RTN4RL2Q86UN3 420 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 MUC15Q8N387 334 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 OR4S1Q8NGB4 309 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 OR51S1Q8NGJ8 323 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 PPP1R35Q8TAP8 253 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 UPRTQ96BW1 309 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 ST6GALNAC5Q9BVH7 336 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 C20orf85Q9H1P6 137 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 SAP30LQ9HAJ7 183 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 CHMP1AQ9HD42 196 aaPredicted RBP10.81□□□□□ -0.68
VPS13D-205ENST00000473099 GCM1Q9NP62 436 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 DNAJB11Q9UBS4 358 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 ANXA10Q9UJ72 324 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 PPP1R3CQ9UQK1 317 aa10.81□□□□□ -0.68
VPS13D-205ENST00000473099 KLF2Q9Y5W3 355 aaPredicted RBP10.81□□□□□ -0.68
VPS13D-205ENST00000473099 IGHV3-64DA0A0J9YX35 117 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 M0QYG6 137 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 SLC33A1O00400 549 aaPredicted RBP10.8□□□□□ -0.68
VPS13D-205ENST00000473099 HS3ST1O14792 307 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 PFDN1O60925 122 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 PEX14O75381 377 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 PLAUP00749 431 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 FCER2P06734 321 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 ZNF735P0CB33 412 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 CDK10Q15131 360 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 SWI5Q1ZZU3 235 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 MICBQ29980 383 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 AGAP6Q5VW22 663 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 OR52W1Q6IF63 320 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 FAAP20Q6NZ36 180 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 GCSAMQ8N6F7 178 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 LILRB1Q8NHL6 650 aaPredicted RBP10.8□□□□□ -0.68
VPS13D-205ENST00000473099 CHAC2Q8WUX2 184 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 RDH5Q92781 318 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 NEUROG1Q92886 237 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 PPP1R14BQ96C90 147 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 SCGB3A2Q96PL1 93 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 GINS4Q9BRT9 223 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 TINAGL1Q9GZM7 467 aaPredicted RBP10.8□□□□□ -0.68
VPS13D-205ENST00000473099 NECAP2Q9NVZ3 263 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 ZNF581Q9P0T4 197 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 WIPI2Q9Y4P8 454 aa10.8□□□□□ -0.68
VPS13D-205ENST00000473099 TRAV6A0A075B6T7 132 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 SIRPB1O00241 398 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 WNT9BO14905 357 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 CTXN2P0C2S0 81 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 MUC1P15941 1255 aaPredicted RBP10.79□□□□□ -0.68
VPS13D-205ENST00000473099 MECP2P51608 486 aaKnown RBP10.79□□□□□ -0.68
VPS13D-205ENST00000473099 TSPAN5P62079 268 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 PAX5Q02548 391 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 PDCD1Q15116 288 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 TATDN3Q17R31 274 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 MST1LQ2TV78 715 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 IDO2Q6ZQW0 420 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 GLCCI1Q86VQ1 547 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 GAPTQ8N292 157 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 ZDHHC22Q8N966 263 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 OR4D10Q8NGI6 311 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 CCDC107Q8WV48 283 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 SLC6A7Q99884 636 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 HDHD3Q9BSH5 251 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms