RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SIRPDQ9H106 197 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 PLGRKTQ9HBL7 147 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 SPACA1Q9HBV2 294 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 NUP50Q9UKX7 468 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 V9GY05 133 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 A0A0G2JK05 382 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 hADV38S2A0JD32 116 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A10PA6NDY2 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A18PA6NE21 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A16PA6NEW6 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A20PA6NIJ5 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A8PA6NJQ4 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A7PA6NKC0 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A22PA8MWA6 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A12PA8MX19 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A5PA8MXJ8 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A23PA8MXZ1 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 SLC33A1O00400 549 aaPredicted RBP12.45□□□□□ -0.42
SNX13-205ENST00000471744 SLC17A2O00624 439 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 SLC22A1O15245 554 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 BPNT1O95861 308 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A15PP0C7V4 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A13PP0C7W8 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A14PP0C7W9 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 FAM90A24PP0C7X0 464 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 MMP9P14780 707 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 JUNBP17275 347 aaPredicted RBP12.45□□□□□ -0.42
SNX13-205ENST00000471744 FPR2P25090 351 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 OR3A1P47881 315 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 EDDM3BP56851 147 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 PIGYQ3MUY2 71 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 PAN3Q58A45 887 aaKnown RBP12.45□□□□□ -0.42
SNX13-205ENST00000471744 GPR157Q5UAW9 335 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 C22orf42Q6IC83 251 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 OR4S1Q8NGB4 309 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 C1orf147Q96MC9 270 aaPredicted RBP12.45□□□□□ -0.42
SNX13-205ENST00000471744 PCGF1Q9BSM1 259 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 C19orf12Q9NSK7 152 aa12.45□□□□□ -0.42
SNX13-205ENST00000471744 AK6Q9Y3D8 172 aaKnown RBP12.45□□□□□ -0.42
SNX13-205ENST00000471744 CRTAPO75718 401 aaPredicted RBP12.44□□□□□ -0.42
SNX13-205ENST00000471744 OR7C1O76099 320 aaPredicted RBP12.44□□□□□ -0.42
SNX13-205ENST00000471744 MGMTP16455 207 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 CD36P16671 472 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 EPHA1P21709 976 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 P2RX3P56373 397 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 EDDM3AQ14507 147 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 TMEM200BQ69YZ2 307 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 METAP1DQ6UB28 335 aaPredicted RBP12.44□□□□□ -0.42
SNX13-205ENST00000471744 GDPGP1Q6ZNW5 385 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 TPRA1Q86W33 373 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 OR4M1Q8NGD0 313 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 KCNG3Q8TAE7 436 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 TBX15Q96SF7 602 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 CHST6Q9GZX3 395 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 PPA2Q9H2U2 334 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 METTL8Q9H825 291 aaKnown RBP12.44□□□□□ -0.42
SNX13-205ENST00000471744 UNKLQ9H9P5 680 aaKnown RBP12.44□□□□□ -0.42
SNX13-205ENST00000471744 TXNL4BQ9NX01 149 aaKnown RBP12.44□□□□□ -0.42
SNX13-205ENST00000471744 LINC00312Q9Y6C7 94 aa12.44□□□□□ -0.42
SNX13-205ENST00000471744 TRAV24A0A0B4J272 114 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 TRAV40A0A0B4J280 105 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 GEMIN2O14893 280 aaKnown RBP12.43□□□□□ -0.42
SNX13-205ENST00000471744 RBP4P02753 201 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 RAB3BP20337 219 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 CFPP27918 469 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 PAX5Q02548 391 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 RAB11BQ15907 218 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 NCR3LG1Q68D85 454 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 OR2W3Q7Z3T1 314 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 VMO1Q7Z5L0 202 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 KCTD7Q96MP8 289 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 BARHL1Q9BZE3 327 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 NCOR1P1Q9H4R4 102 aa12.43□□□□□ -0.42
SNX13-205ENST00000471744 ANK3Q12955 4377 aaKnown RBP12.42□□□□□ -0.42
SNX13-205ENST00000471744 TRGV10A0A0A0MS01 117 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 A0A1W2PP11 408 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 GLAP06280 429 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 ZNF728P0DKX0 622 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 ARSBP15848 533 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 PRTN3P24158 256 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 RBM39Q14498 530 aaKnown RBP12.42□□□□□ -0.42
SNX13-205ENST00000471744 TAF9Q16594 264 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 KLF17Q5JT82 389 aaPredicted RBP12.42□□□□□ -0.42
SNX13-205ENST00000471744 KRBOX4Q5JUW0 171 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 C9orf139Q6ZV77 190 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 BPIFB2Q8N4F0 458 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 TMEM104Q8NE00 496 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 Q96M66 194 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 ZNF714Q96N38 554 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 GFI1Q99684 422 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 CHCHD6Q9BRQ6 235 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 DPCDQ9BVM2 203 aaPredicted RBP12.42□□□□□ -0.42
SNX13-205ENST00000471744 TMEM59Q9BXS4 323 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 SELENOIQ9C0D9 397 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 MS4A7Q9GZW8 240 aaPredicted RBP12.42□□□□□ -0.42
SNX13-205ENST00000471744 OR51E2Q9H255 320 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 BANF2Q9H503 90 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 STEAP1Q9UHE8 339 aa12.42□□□□□ -0.42
SNX13-205ENST00000471744 UBE2J1Q9Y385 318 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms