RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 NT5CQ8TCD5 201 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 CPB2Q96IY4 423 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 C11orf70Q9BRQ4 267 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 AHSPQ9NZD4 102 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 ZMAT5Q9UDW3 170 aaKnown RBP0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 FLVCR2Q9UPI3 526 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 C14orf166Q9Y224 244 aaKnown RBP0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 MINOS1-NBL1R4GNA1 71 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 A0A1W2PRG6 482 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 SLC5A10A0PJK1 596 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 DNAJB6O75190 326 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 HSBP1O75506 76 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 GYPCP04921 128 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 SCGB1C2P0DMR2 95 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 CRABP1P29762 137 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 HMGN5P82970 282 aaKnown RBP0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 FAM229BQ4G0N7 80 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 ZCWPW2Q504Y3 356 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 CLEC12AQ5QGZ9 265 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 GALNT10Q86SR1 603 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 CMTM8Q8IZV2 173 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 OR6K3Q8NGY3 331 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 SCGB1C1Q8TD33 95 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 RILPQ96NA2 401 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 OR2M4Q96R27 311 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 ANAPC13Q9BS18 74 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 SPZ1Q9BXG8 430 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 SHCBP1LQ9BZQ2 653 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 CHRNA10Q9GZZ6 450 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 POMKQ9H5K3 350 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 VPS37BQ9H9H4 285 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 C6orf50Q9HD87 102 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 DLG5Q8TDM6 1919 aa0.34□□□□□ -2.36
PRPF40A-207ENST00000471701 ARHGAP32A7KAX9 2087 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 RTEL1-TNFRSF6BF6WH68 1400 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 IGSF23A1L1A6 192 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 VPS37CA5D8V6 355 aaPredicted RBP0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 ZNF701M0R085 212 aaPredicted RBP0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 SLC25A20O43772 301 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 SNX4O95219 450 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 SOX14O95416 240 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 GUSBP08236 651 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 CLDN18P56856 261 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 ELP2Q6IA86 826 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 VN1R4Q7Z5H5 301 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 FAM58AQ8N1B3 248 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 FER1L6-AS1Q8NA97 138 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 NDNFQ8TB73 568 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 TCP10LQ8TDR4 215 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 TWIST2Q8WVJ9 160 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 CMBLQ96DG6 245 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 FMC1Q96HJ9 113 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 OLFM3Q96PB7 478 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 LINC01587Q99440 93 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 GPR22Q99680 433 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 COA1Q9GZY4 146 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 C12orf4Q9NQ89 552 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 SDHAF3Q9NRP4 125 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 ROS1P08922 2347 aa0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 DENND4BO75064 1496 aaPredicted RBP0.33□□□□□ -2.36
PRPF40A-207ENST00000471701 ATRNO75882 1429 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 IGLV3-9A0A075B6K5 115 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 SYNJ2BP-COX16A0A087WUM0 186 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 IGHV1-45A0A0A0MS14 117 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 CD300LBA8K4G0 201 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 OR5AL1P0C617 328 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 ELK4P28324 431 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 GABRR2P28476 465 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 BNIP2Q12982 314 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 HTR4Q13639 388 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 IDI1Q13907 227 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 TOMM34Q15785 309 aaPredicted RBP0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 NELFCDQ8IXH7 590 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 MICU2Q8IYU8 434 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 SPACA4Q8TDM5 124 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 NAT6Q93015 286 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 SLC38A1Q9H2H9 487 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 ARMC7Q9H6L4 198 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 KCNIP2Q9NS61 270 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 BTRCQ9Y297 605 aa0.32□□□□□ -2.36
PRPF40A-207ENST00000471701 TRAV25A0A0B4J276 109 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 TRAPPC6AO75865 159 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 KLK1P06870 262 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 IL12BP29460 328 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 MAGEA12P43365 314 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 IFFO1Q0D2I5 559 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 CEACAM21Q3KPI0 293 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 OR6K6Q8NGW6 343 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 OR4X1Q8NH49 305 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 OR51A7Q8NH64 312 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 CCL17Q92583 94 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 REEP6Q96HR9 211 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 TSNAXQ99598 290 aaKnown RBP0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 AUNIPQ9H7T9 357 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 NMRK1Q9NWW6 199 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 ANXA10Q9UJ72 324 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 SLC22A14Q9Y267 594 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 CFL2Q9Y281 166 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 HEY1Q9Y5J3 304 aa0.31□□□□□ -2.36
PRPF40A-207ENST00000471701 POLR3AO14802 1390 aaPredicted RBP0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms