RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 CLDN20P56880 219 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 CLEC9AQ6UXN8 241 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 STAC2Q6ZMT1 411 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 C5orf17Q8NAS9 161 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 SLC24A4Q8NFF2 622 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 RNASE6Q93091 150 aaKnown RBP7.52□□□□□ -1.2
CD47-204ENST00000471694 YIPF5Q969M3 257 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 KPTNQ9Y664 436 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 POM121CA8CG34 1229 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 SNAPINO95295 136 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 PTTG1O95997 202 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 RPL34P49207 117 aaKnown RBP7.52□□□□□ -1.21
CD47-204ENST00000471694 GABRA6Q16445 453 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 OR4Q3Q8NH05 313 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 SLC25A28Q96A46 364 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 TRIP12Q14669 1992 aaPredicted RBP7.52□□□□□ -1.21
CD47-204ENST00000471694 TRAPPC2P0DI81 140 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 TRAPPC2BP0DI82 140 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 YBX1P67809 324 aaKnown RBP7.52□□□□□ -1.21
CD47-204ENST00000471694 SOHLH1Q5JUK2 328 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 MARCH1Q8TCQ1 289 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 SCARB1Q8WTV0 552 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 RNF2Q99496 336 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 AP5S1Q9NUS5 200 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 TRDV1A0A1B0GX56 115 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 GGNBP1Q5YKI7 109 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 HSD17B13Q7Z5P4 300 aaPredicted RBP7.52□□□□□ -1.21
CD47-204ENST00000471694 LAX1Q8IWV1 398 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 ZNF696Q9H7X3 374 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 TCRBV16S1A1N1A0A5B0 115 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 IGKV3-20P01619 116 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 SLC25A53Q5H9E4 307 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 FAM166AQ6J272 317 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 VN1R4Q7Z5H5 301 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 FAM219AQ8IW50 185 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 SLC25A46Q96AG3 418 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 ARHGDIGQ99819 225 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 ASB1Q9Y576 335 aa7.52□□□□□ -1.21
CD47-204ENST00000471694 LOC102723971A0A1B0GUV8 181 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 ZNHIT1O43257 154 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 HMGN3Q15651 99 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 Q71RC1 249 aaPredicted RBP7.51□□□□□ -1.21
CD47-204ENST00000471694 C9orf40Q8IXQ3 194 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 OR13F1Q8NGS4 319 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 ZPLD1Q8TCW7 415 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 PACRGQ96M98 296 aaPredicted RBP7.51□□□□□ -1.21
CD47-204ENST00000471694 SLC45A2Q9UMX9 530 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 BOLA1Q9Y3E2 137 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 E5RGE8 158 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 NEURL1O76050 574 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 NCR3LG1Q68D85 454 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 CBLN3Q6UW01 205 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 ZNF547Q8IVP9 402 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 OR4A5Q8NH83 315 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 NSG2Q9Y328 171 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 YTHDF2Q9Y5A9 579 aaKnown RBP7.51□□□□□ -1.21
CD47-204ENST00000471694 MOSPD3O75425 235 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 TSPO2Q5TGU0 170 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 C6orf201Q7Z4U5 140 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 RGS13O14921 159 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 ALPLP05186 524 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 SRD5A1P18405 259 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 M6PRP20645 277 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 SNRPD3P62318 126 aaKnown RBP7.51□□□□□ -1.21
CD47-204ENST00000471694 CDK5Q00535 292 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 FAM27E3Q08E93 113 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.51□□□□□ -1.21
CD47-204ENST00000471694 SP5Q6BEB4 398 aaPredicted RBP7.51□□□□□ -1.21
CD47-204ENST00000471694 SLC16A13Q7RTY0 426 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 PNKDQ8N490 385 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 RNF141Q8WVD5 230 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 LRRC3BQ96PB8 259 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 ZNF426Q9BUY5 554 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 UQCC1Q9NVA1 299 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 SIX6O95475 246 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 LIMS3P0CW19 117 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 LIMS4P0CW20 117 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 LTBRP36941 435 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 Q6ZN92 141 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 OR8B12Q8NGG6 310 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 EEF1AKMT3Q96AZ1 226 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 C10orf90Q96M02 699 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 NPFFR1Q9GZQ6 430 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 ZG16O60844 167 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 COX6A1P12074 109 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 WNT5AP41221 380 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 DSCR9P59020 149 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 SGMS2Q8NHU3 365 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 ZNF721Q8TF20 911 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 SMIM19Q96E16 107 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 SEC22CQ9BRL7 303 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 SAV1Q9H4B6 383 aaPredicted RBP7.51□□□□□ -1.21
CD47-204ENST00000471694 C12orf10Q9HB07 376 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 GP6Q9HCN6 339 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 PEMTQ9UBM1 199 aa7.51□□□□□ -1.21
CD47-204ENST00000471694 ARPC4-TTLL3A0A0A6YYG9 625 aa7.5□□□□□ -1.21
CD47-204ENST00000471694 MAGEB1P43366 347 aa7.5□□□□□ -1.21
CD47-204ENST00000471694 ALG14Q96F25 216 aa7.5□□□□□ -1.21
CD47-204ENST00000471694 ARHGAP5-AS1Q96IT6 56 aa7.5□□□□□ -1.21
CD47-204ENST00000471694 C19orf43Q9BQ61 176 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms