RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 U3KQK5 164 aa7.25□□□□□ -1.25
CPSF4-211ENST00000471455 A6NIN4 97 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 C3orf84H3BNL1 204 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 BUB1B-PAK6H3BSN5 160 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 SH2D1BO14796 132 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 RPP14O95059 124 aaKnown RBP7.24□□□□□ -1.25
CPSF4-211ENST00000471455 ZFPL1O95159 310 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 IGLV1-47P01700 117 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 UBCP0CG48 685 aaKnown RBP7.24□□□□□ -1.25
CPSF4-211ENST00000471455 PRKACAP17612 351 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 PRKACBP22694 351 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 CD24P25063 80 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 GDNFP39905 211 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 OR3A1P47881 315 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 OR3A4PP47883 348 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 POU3F4P49335 361 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 CRISP1P54107 249 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 HLA-DRB5Q30154 266 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 NXNL2Q5VZ03 156 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 TMEM236Q5W0B7 351 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 LHFPL2Q6ZUX7 228 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 OR2W3Q7Z3T1 314 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 FAM220AQ7Z4H9 259 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 THNSL2Q86YJ6 484 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 FOXRED2Q8IWF2 684 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 ADGRG5Q8IZF4 528 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 CHST4Q8NCG5 386 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 OR52N4Q8NGI2 321 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 TOMM40LQ969M1 308 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 RHOFQ9HBH0 211 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 ADGRL4Q9HBW9 690 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 RBFOX1Q9NWB1 397 aaKnown RBP7.24□□□□□ -1.25
CPSF4-211ENST00000471455 OR6C3Q9NZP0 311 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 ENOPH1Q9UHY7 261 aa7.24□□□□□ -1.25
CPSF4-211ENST00000471455 MRM2Q9UI43 246 aaKnown RBP7.24□□□□□ -1.25
CPSF4-211ENST00000471455 A0A087X0M5 115 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 A0A1B0GX30 115 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 ODAMA1E959 279 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 ZNF729A6NN14 1252 aaPredicted RBP7.23□□□□□ -1.25
CPSF4-211ENST00000471455 SERPINE3A8MV23 424 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 F8VVB4 439 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 F8VWA3 439 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 H0YHG0 523 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 SIRPB1O00241 398 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 FGF16O43320 207 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 PSPNO60542 156 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 ENTPD6O75354 484 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 SULT1C4O75897 302 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 INMTO95050 263 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 CSN2P05814 226 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 CCDC159P0C7I6 412 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 ZNF20P17024 532 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 CALB2P22676 271 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 MTCP1P56278 107 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 MS4A2Q01362 244 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 RBM39Q14498 530 aaKnown RBP7.23□□□□□ -1.25
CPSF4-211ENST00000471455 UBE2V2Q15819 145 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 ODF4Q2M2E3 257 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 ETV3LQ6ZN32 361 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 PLEKHG7Q6ZR37 379 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 TMEM179BQ7Z7N9 219 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 ZNF695Q8IW36 515 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 KLHL30-AS1Q8NEE0 82 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 OR9G1Q8NH87 305 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 CORO2AQ92828 525 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 SPSB1Q96BD6 273 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 NRBF2Q96F24 287 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 NSL1Q96IY1 281 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 GON7Q9BXV9 100 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 HHLA2Q9UM44 414 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 COL7A1Q02388 2944 aa7.23□□□□□ -1.25
CPSF4-211ENST00000471455 STAB2Q8WWQ8 2551 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 IGKV1-27A0A075B6S5 117 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 LOC107986453A0A1B0GWG9 222 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 METTL15A6NJ78 407 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 SH2D7A6NKC9 451 aaPredicted RBP7.22□□□□□ -1.25
CPSF4-211ENST00000471455 PRKYO43930 277 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 MMP23AO75900 390 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 OR2H2O95918 312 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 AMY1AP04745 511 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 AMY2AP04746 511 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 OR2T7P0C7T2 308 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 ZNF44P15621 663 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 TMEM11P17152 192 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 BCL3P20749 454 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 DUSP1P28562 367 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 SNU13P55769 128 aaKnown RBP7.22□□□□□ -1.25
CPSF4-211ENST00000471455 RAB25P57735 213 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 BNIP1Q12981 228 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 MADCAM1Q13477 382 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 HES1Q14469 280 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 PTGES3Q15185 160 aaKnown RBP7.22□□□□□ -1.25
CPSF4-211ENST00000471455 KRBOX4Q5JUW0 171 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 C9orf66Q5T8R8 295 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 C10orf99Q6UWK7 81 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 UTS2BQ765I0 119 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 SLC35E3Q7Z769 313 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 ZNF329Q86UD4 541 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 CATSPERDQ86XM0 798 aa7.22□□□□□ -1.25
CPSF4-211ENST00000471455 HS3ST5Q8IZT8 346 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms