RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TNFAIP6P98066 277 aaPredicted RBP5.6□□□□□ -1.51
VAMP3-202ENST00000470357 RBM39Q14498 530 aaKnown RBP5.6□□□□□ -1.51
VAMP3-202ENST00000470357 SMIM21Q3B7S5 101 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 DMRTC1Q5HYR2 192 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 SPIN3Q5JUX0 258 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 AGAP6Q5VW22 663 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 OR10K2Q6IF99 312 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 CRIP3Q6Q6R5 217 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 MEX3BQ6ZN04 569 aaKnown RBP5.6□□□□□ -1.51
VAMP3-202ENST00000470357 Q6ZR03 302 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 C1QL2Q7Z5L3 287 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 LRP11Q86VZ4 500 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 TGIF2LYQ8IUE0 185 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 C1orf87Q8N0U7 546 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 FAM58AQ8N1B3 248 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 MUC15Q8N387 334 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 POC1AQ8NBT0 407 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 CHST4Q8NCG5 386 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 TMEM104Q8NE00 496 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 OR4M2Q8NGB6 313 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 OR10AD1Q8NGE0 317 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 SMIM4Q8WVI0 70 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 SLAMF9Q96A28 289 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 BANF2Q9H503 90 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 AUNIPQ9H7T9 357 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 SEBOXQ9HB31 216 aaPredicted RBP5.6□□□□□ -1.51
VAMP3-202ENST00000470357 DECR2Q9NUI1 292 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 ZNF107Q9UII5 783 aaPredicted RBP5.6□□□□□ -1.51
VAMP3-202ENST00000470357 HSF4Q9ULV5 492 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 ST3GAL6Q9Y274 331 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 NPTNQ9Y639 398 aa5.6□□□□□ -1.51
VAMP3-202ENST00000470357 DSCAMO60469 2012 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 IGKV1-12A0A0C4DH73 117 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 hCG_1807616A0A1W2PRN6 198 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 A6NNC1 897 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 CENPXA8MT69 81 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 H0YL77 283 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 H7C1Q1 480 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 CDIPTO14735 213 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 HS3ST1O14792 307 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 SH2D1BO14796 132 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 SPRY3O43610 288 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 SYNGR1O43759 233 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 PDCD6O75340 191 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 RBBP9O75884 186 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 KNG1P01042 644 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 IGKV1D-12P01611 117 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 IGHV1-46P01743 117 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 HLA-DQB1P01920 261 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 LPLP06858 475 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 SFTPBP07988 381 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 MELTFP08582 738 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 IL7P13232 177 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 HIST1H1DP16402 221 aaKnown RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 PRKACAP17612 351 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 BCL3P20749 454 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 FUT3P21217 361 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 LOXP28300 417 aaPredicted RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 FAUP35544 74 aaKnown RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 PTH2RP49190 550 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 PPOXP50336 477 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 GNG2P59768 71 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 ERVK11-1P61568 191 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 MAB21L1Q13394 359 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 CR1LQ2VPA4 569 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 CDNFQ49AH0 187 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 TMEM255AQ5JRV8 349 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 MZT2BQ6NZ67 158 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 WDR82Q6UXN9 313 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 DNM1P46Q6ZS02 220 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 Q6ZTK2 550 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 RNF144BQ7Z419 303 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 SNX29P2Q8IUI4 249 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 MINDY2Q8NBR6 621 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 SYT8Q8NBV8 401 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 Q8TCH9 128 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 GTF3AQ92664 365 aaKnown RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 NRGNQ92686 78 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 EMG1Q92979 244 aaKnown RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 DVL3Q92997 716 aaPredicted RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 OR2V2Q96R30 315 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 ABHD1Q96SE0 405 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 NKX3-1Q99801 234 aaPredicted RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 FOXC2Q99958 501 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 NRIP2Q9BQI9 281 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 C7orf50Q9BRJ6 194 aaKnown RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 THAP7Q9BT49 309 aaPredicted RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 FGF23Q9GZV9 251 aaPredicted RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 RAB1BQ9H0U4 201 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 RIMS4Q9H426 269 aaPredicted RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 KCNK15Q9H427 330 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 IFT22Q9H7X7 185 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 SAP30LQ9HAJ7 183 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 ABCB10Q9NRK6 738 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 CBLN4Q9NTU7 201 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 PLEKHJ1Q9NW61 149 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 C1orf123Q9NWV4 160 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 MTCH1Q9NZJ7 389 aa5.59□□□□□ -1.51
VAMP3-202ENST00000470357 MYEF2Q9P2K5 600 aaKnown RBP5.59□□□□□ -1.51
VAMP3-202ENST00000470357 HRNRQ86YZ3 2850 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms