RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ZNF181Q2M3W8 571 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 AGAP6Q5VW22 663 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 WDR82Q6UXN9 313 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SLC25A26Q70HW3 274 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 BIVMQ86UB2 503 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SCCPDHQ8NBX0 429 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 TMEM104Q8NE00 496 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 OR51D1Q8NGF3 324 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 OR10K1Q8NGX5 313 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 LGALS14Q8TCE9 139 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 AQP3Q92482 292 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SEH1LQ96EE3 360 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 TECTBQ96PL2 329 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ABHD1Q96SE0 405 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MICU1Q9BPX6 476 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SOSTQ9BQB4 213 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 RTL8AQ9BWD3 113 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MS4A7Q9GZW8 240 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SLC22A4Q9H015 551 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SLITRK2Q9H156 845 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 TLNRD1Q9H1K6 362 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 CXXC4Q9H2H0 198 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 HEATR1Q9H583 2144 aaKnown RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 DYNLRB1Q9NP97 96 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 CYSLTR2Q9NS75 346 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MTCH1Q9NZJ7 389 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 EXTL2Q9UBQ6 330 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 IL19Q9UHD0 177 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SLC7A11Q9UPY5 501 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MRPS7Q9Y2R9 242 aaKnown RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 PKDREJQ9NTG1 2253 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 RAI1Q7Z5J4 1906 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 PLCE1Q9P212 2302 aa3.96□□□□□ -1.77
SF3B1-208ENST00000470268 DOPEY2Q9Y3R5 2298 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 FASNP49327 2511 aaKnown RBP3.96□□□□□ -1.78
SF3B1-208ENST00000470268 LOC102723971A0A1B0GUV8 181 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 LRP5LA4QPB2 252 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-208ENST00000470268 PDCD5O14737 125 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 WNT9BO14905 357 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 LDLRAD4O15165 306 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 AKR7A2O43488 359 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 FCER2P06734 321 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 ERCC1P07992 297 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-208ENST00000470268 EGR1P18146 543 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 COL8A2P25067 703 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 HTR2CP28335 458 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 PPOXP50336 477 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 EFNB2P52799 333 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 ATP1B3P54709 279 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 LOXL3P58215 753 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 UNC119Q13432 240 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 FAM201AQ5SY85 155 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 GLT8D1Q68CQ7 371 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 GLIPR1L1Q6UWM5 242 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 ASCL4Q6XD76 172 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 RTN4RL2Q86UN3 420 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 MOGAT3Q86VF5 341 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 LURAP1LQ8IV03 231 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 CDH26Q8IXH8 852 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 Q8N402 240 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 GCSAMQ8N6F7 178 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 SPERTQ8NA61 448 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 C19orf18Q8NEA5 215 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 OR6M1Q8NGM8 313 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 TNFAIP8L1Q8WVP5 186 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 SLAMF9Q96A28 289 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 SLC25A38Q96DW6 304 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 HIST1H2AAQ96QV6 131 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 GPER1Q99527 375 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 GAL3ST1Q99999 423 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 UQCC2Q9BRT2 126 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 WDR13Q9H1Z4 485 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 SAP30LQ9HAJ7 183 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 RBFOX1Q9NWB1 397 aaKnown RBP3.96□□□□□ -1.78
SF3B1-208ENST00000470268 NKIRAS2Q9NYR9 191 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF581Q9P0T4 197 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 IL36RNQ9UBH0 155 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 OR5V1Q9UGF6 321 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 STEAP1Q9UHE8 339 aa3.96□□□□□ -1.78
SF3B1-208ENST00000470268 MRPS28Q9Y2Q9 187 aaKnown RBP3.96□□□□□ -1.78
SF3B1-208ENST00000470268 A0A0B4J293 547 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 A6NLC8 198 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM210A6NLX4 147 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 MARCH11A6NNE9 402 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 A8MV72 311 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM14DPA8MWL7 114 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 H7C417 338 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 J3QT63 122 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 SCAF4O95104 1147 aaKnown RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 CYB5R3P00387 301 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 TFF1P04155 84 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 ELANEP08246 267 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 CD3GP09693 182 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PGA5P0DJD9 388 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM225BP0DP42 221 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 BCL3P20749 454 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 SSTR2P30874 369 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 RCVRNP35243 200 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 GMFBP60983 142 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms